Crystallization and preliminary structural results of catalase from human erythrocytes. 1999

M J Maté, and M Ortiz-Lombardía, and A Marina, and I Fita
CID-CSIC, Jordi-Girona 18-26, 08034 -Barcelona, Spain.

Catalase (hydrogen peroxide:hydrogen peroxide oxidoreductase, E.C. 1. 11.1.6) is present in most aerobic prokaryotic and eukaryotic cells. Despite a large number of studies on catalases, the only mammalian catalase structure available is that from beef liver, in which about 50% of the haem groups are degraded to bile pigments. Three different crystal forms of human erythrocyte catalase were obtained by the hanging-drop vapour-diffusion technique using PEG as precipitant. Monoclinic crystals, with space group P21 and unit-cell parameters a = 102.9, b = 140.0, c = 173.6 A and beta = 103.2 degrees, require NADP(H) in the crystallization solution. Two types of hexagonal packing, with unit-cell parameters of either a = b = 86. 9, c = 255.5 A or a = b = 90.0, c = 521.2 A, were obtained under identical crystallization conditions in the absence of NADP(H). Only one diffraction data set could be collected: this was obtained from the hexagonal crystals with the smaller c axis using synchrotron radiation, with resolution to 2.65 A. A molecular-replacement solution, determined using a modified beef-liver catalase model as a search structure, corresponds to space group P6422 and contains a single subunit in the asymmetric unit, with an estimated solvent volume of about 50%. The packing determined suggests how minor rearrangements might allow the transition between both hexagonal crystal forms and provides an explanation for the anisotropic character of the corresponding diffractions.

UI MeSH Term Description Entries
D009249 NADP Nicotinamide adenine dinucleotide phosphate. A coenzyme composed of ribosylnicotinamide 5'-phosphate (NMN) coupled by pyrophosphate linkage to the 5'-phosphate adenosine 2',5'-bisphosphate. It serves as an electron carrier in a number of reactions, being alternately oxidized (NADP+) and reduced (NADPH). (Dorland, 27th ed) Coenzyme II,Nicotinamide-Adenine Dinucleotide Phosphate,Triphosphopyridine Nucleotide,NADPH,Dinucleotide Phosphate, Nicotinamide-Adenine,Nicotinamide Adenine Dinucleotide Phosphate,Nucleotide, Triphosphopyridine,Phosphate, Nicotinamide-Adenine Dinucleotide
D011487 Protein Conformation The characteristic 3-dimensional shape of a protein, including the secondary, supersecondary (motifs), tertiary (domains) and quaternary structure of the peptide chain. PROTEIN STRUCTURE, QUATERNARY describes the conformation assumed by multimeric proteins (aggregates of more than one polypeptide chain). Conformation, Protein,Conformations, Protein,Protein Conformations
D002374 Catalase An oxidoreductase that catalyzes the conversion of HYDROGEN PEROXIDE to water and oxygen. It is present in many animal cells. A deficiency of this enzyme results in ACATALASIA. Catalase A,Catalase T,Manganese Catalase,Mn Catalase
D003460 Crystallization The formation of crystalline substances from solutions or melts. (McGraw-Hill Dictionary of Scientific and Technical Terms, 4th ed) Crystalline Polymorphs,Polymorphism, Crystallization,Crystal Growth,Polymorphic Crystals,Crystal, Polymorphic,Crystalline Polymorph,Crystallization Polymorphism,Crystallization Polymorphisms,Crystals, Polymorphic,Growth, Crystal,Polymorph, Crystalline,Polymorphic Crystal,Polymorphisms, Crystallization,Polymorphs, Crystalline
D004912 Erythrocytes Red blood cells. Mature erythrocytes are non-nucleated, biconcave disks containing HEMOGLOBIN whose function is to transport OXYGEN. Blood Cells, Red,Blood Corpuscles, Red,Red Blood Cells,Red Blood Corpuscles,Blood Cell, Red,Blood Corpuscle, Red,Erythrocyte,Red Blood Cell,Red Blood Corpuscle
D006801 Humans Members of the species Homo sapiens. Homo sapiens,Man (Taxonomy),Human,Man, Modern,Modern Man
D018360 Crystallography, X-Ray The study of crystal structure using X-RAY DIFFRACTION techniques. (McGraw-Hill Dictionary of Scientific and Technical Terms, 4th ed) X-Ray Crystallography,Crystallography, X Ray,Crystallography, Xray,X Ray Crystallography,Xray Crystallography,Crystallographies, X Ray,X Ray Crystallographies

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