Structure of the O-polysaccharide of the lipopolysaccharide of Pseudomonas syringae pv. garcae ICMP 8047. 1999

E L Zdorovenko, and V V Ovod, and A S Shashkov, and N A Kocharova, and Y A Knirel, and K Krohn
Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Moscow, 117913, Russia.

The composition and structure of the O-polysaccharide of the lipopolysaccharide of Pseudomonas syringae pathovar garcae ICMP 8047 were studied using methylation analyses, Smith degradation, and 1H- and 13C-NMR spectroscopy, including two-dimensional correlation spectroscopy (COSY), total correlation spectroscopy (TOCSY), nuclear Overhauser effect spectroscopy (NOESY), and H-detected 1H,13C heteronuclear multiple-quantum coherence (HMQC) experiments. The polysaccharide was found to contain L-rhamnose and 3-acetamido-3, 6-dideoxy-D-galactose (D-Fuc3NAc) in the ratio 4:1 and to consist of two types of pentasaccharide repeating units. The major (1) and minor (2) repeating units differ from each other only in the position of substitution of one of the rhamnose residues in the main chain. Similar structural heterogeneity has been reported formerly in O-polysaccharides of some other P. syringae strains having a similar monosaccharide composition. A Fuc3NAc residue is attached to the main rhamnan chain as a side chain by a (alpha1-->4) glycosidic linkage; this has not hitherto been described in P. syringae: [figure].

UI MeSH Term Description Entries
D008969 Molecular Sequence Data Descriptions of specific amino acid, carbohydrate, or nucleotide sequences which have appeared in the published literature and/or are deposited in and maintained by databanks such as GENBANK, European Molecular Biology Laboratory (EMBL), National Biomedical Research Foundation (NBRF), or other sequence repositories. Sequence Data, Molecular,Molecular Sequencing Data,Data, Molecular Sequence,Data, Molecular Sequencing,Sequencing Data, Molecular
D009682 Magnetic Resonance Spectroscopy Spectroscopic method of measuring the magnetic moment of elementary particles such as atomic nuclei, protons or electrons. It is employed in clinical applications such as NMR Tomography (MAGNETIC RESONANCE IMAGING). In Vivo NMR Spectroscopy,MR Spectroscopy,Magnetic Resonance,NMR Spectroscopy,NMR Spectroscopy, In Vivo,Nuclear Magnetic Resonance,Spectroscopy, Magnetic Resonance,Spectroscopy, NMR,Spectroscopy, Nuclear Magnetic Resonance,Magnetic Resonance Spectroscopies,Magnetic Resonance, Nuclear,NMR Spectroscopies,Resonance Spectroscopy, Magnetic,Resonance, Magnetic,Resonance, Nuclear Magnetic,Spectroscopies, NMR,Spectroscopy, MR
D011549 Pseudomonas A genus of gram-negative, aerobic, rod-shaped bacteria widely distributed in nature. Some species are pathogenic for humans, animals, and plants. Chryseomonas,Pseudomona,Flavimonas
D002236 Carbohydrate Conformation The characteristic 3-dimensional shape of a carbohydrate. Carbohydrate Linkage,Carbohydrate Conformations,Carbohydrate Linkages,Conformation, Carbohydrate,Conformations, Carbohydrate,Linkage, Carbohydrate,Linkages, Carbohydrate
D002240 Carbohydrate Sequence The sequence of carbohydrates within POLYSACCHARIDES; GLYCOPROTEINS; and GLYCOLIPIDS. Carbohydrate Sequences,Sequence, Carbohydrate,Sequences, Carbohydrate
D019081 O Antigens The lipopolysaccharide-protein somatic antigens, usually from gram-negative bacteria, important in the serological classification of enteric bacilli. The O-specific chains determine the specificity of the O antigens of a given serotype. O antigens are the immunodominant part of the lipopolysaccharide molecule in the intact bacterial cell. (From Singleton & Sainsbury, Dictionary of Microbiology and Molecular Biology, 2d ed) O-Antigen,O-Specific Polysaccharides,O Antigen,O Antigen, Bacterial,O-Antigens,O-Specific Polysaccharide,Antigen, Bacterial O,Antigen, O,Antigens, O,Bacterial O Antigen,O Specific Polysaccharide,O Specific Polysaccharides,Polysaccharide, O-Specific,Polysaccharides, O-Specific

Related Publications

E L Zdorovenko, and V V Ovod, and A S Shashkov, and N A Kocharova, and Y A Knirel, and K Krohn
June 1991, Carbohydrate research,
E L Zdorovenko, and V V Ovod, and A S Shashkov, and N A Kocharova, and Y A Knirel, and K Krohn
April 2001, Biochemistry. Biokhimiia,
E L Zdorovenko, and V V Ovod, and A S Shashkov, and N A Kocharova, and Y A Knirel, and K Krohn
June 1991, Carbohydrate research,
E L Zdorovenko, and V V Ovod, and A S Shashkov, and N A Kocharova, and Y A Knirel, and K Krohn
April 1992, Carbohydrate research,
E L Zdorovenko, and V V Ovod, and A S Shashkov, and N A Kocharova, and Y A Knirel, and K Krohn
June 1991, Carbohydrate research,
E L Zdorovenko, and V V Ovod, and A S Shashkov, and N A Kocharova, and Y A Knirel, and K Krohn
February 1988, Bioorganicheskaia khimiia,
E L Zdorovenko, and V V Ovod, and A S Shashkov, and N A Kocharova, and Y A Knirel, and K Krohn
January 1990, Mikrobiologicheskii zhurnal,
E L Zdorovenko, and V V Ovod, and A S Shashkov, and N A Kocharova, and Y A Knirel, and K Krohn
April 1993, Carbohydrate research,
E L Zdorovenko, and V V Ovod, and A S Shashkov, and N A Kocharova, and Y A Knirel, and K Krohn
May 1985, European journal of biochemistry,
E L Zdorovenko, and V V Ovod, and A S Shashkov, and N A Kocharova, and Y A Knirel, and K Krohn
January 2022, Frontiers in plant science,
Copied contents to your clipboard!