Biomaterial Database

Seasonal variation in microbial communities and organic malodor indicator compound concentrations in various types of swine manure storage systems. 2002

L Merrill, and L J Halverson

Department of Microbiology, 2537 Agronomy Hall, Iowa State University, Ames, IA 50011-1010, USA.

Anaerobic manure storage systems are one of the major contributors to the odor and environmental pollution associated with swine (Sus scrofa) production systems. The microbial ecology of manure storage systems and the relationships between microbial communities and odor production are largely unknown. In this study, we used community fatty acid methyl ester (FAME) analysis to generate lipid profiles to assess seasonal differences among microbial communities inhabiting various types of outdoor swine manure storage systems. Concurrently, we measured manure concentrations of several malodor indicator compounds as well as pH, temperature, and solids content. Principal components analysis (PCA) showed that there are differences in FAME profiles among the swine manure storage systems examined and most of the variation was in the relative abundance of 18:0, 18:1omega7t, 18:1omega7c/omega9t/omega12t, and 16:1omega7t/i15:0 2OH FAMEs. The PCA of the FAME profiles revealed that the phototrophic systems were more similar to each other and that the nonphototrophic systems were more similar to each other than they were to phototrophic lagoons. There were seasonal changes in the FAME profiles in the phototrophic systems and the concrete nonphototrophic basin (CNPB), and in one phototrophic system, the FAME profiles more closely resembled a CNPB FAME profile during the winter than the other phototrophic lagoons. In the phototrophic lagoon systems, there was a direct correlation between the abundance of the FAMEs identified in the PCA and manure concentrations of phenol, p-cresol, and 4-ethyl phenol. In the CNPB, there was a negative correlation between the total phenolics concentration and the 18:1omega7t FAME. Our results indicate that community FAME profiles could be used as a diagnostic tool for obtaining preliminary evidence that management practices are altering the system's microbial community to one that favors less air pollution potential.

UI	MeSH Term	Description	Entries
D008372	Manure	Accumulations of solid or liquid animal excreta usually from stables and barnyards with or without litter material. Its chief application is as a fertilizer. (From Webster's 3d ed)
D009812	Odorants	The volatile portions of chemical substances perceptible by the sense of smell.	Odors,Aroma,Fragrance,Scents,Aromas,Fragrances,Odor,Odorant,Scent
D011157	Population Dynamics	The pattern of any process, or the interrelationship of phenomena, which affects growth or change within a population.	Malthusianism,Neomalthusianism,Demographic Aging,Demographic Transition,Optimum Population,Population Decrease,Population Pressure,Population Replacement,Population Theory,Residential Mobility,Rural-Urban Migration,Stable Population,Stationary Population,Aging, Demographic,Decrease, Population,Decreases, Population,Demographic Transitions,Dynamics, Population,Migration, Rural-Urban,Migrations, Rural-Urban,Mobilities, Residential,Mobility, Residential,Optimum Populations,Population Decreases,Population Pressures,Population Replacements,Population Theories,Population, Optimum,Population, Stable,Population, Stationary,Populations, Optimum,Populations, Stable,Populations, Stationary,Pressure, Population,Pressures, Population,Replacement, Population,Replacements, Population,Residential Mobilities,Rural Urban Migration,Rural-Urban Migrations,Stable Populations,Stationary Populations,Theories, Population,Theory, Population,Transition, Demographic,Transitions, Demographic
D012037	Refuse Disposal	The discarding or destroying of garbage, sewage, or other waste matter or its transformation into something useful or innocuous.	Waste Disposal, Solid,Disposal, Refuse,Disposal, Solid Waste,Disposals, Refuse,Disposals, Solid Waste,Refuse Disposals,Solid Waste Disposal,Solid Waste Disposals,Waste Disposals, Solid
D004784	Environmental Monitoring	The monitoring of the level of toxins, chemical pollutants, microbial contaminants, or other harmful substances in the environment (soil, air, and water), workplace, or in the bodies of people and animals present in that environment.	Monitoring, Environmental,Environmental Surveillance,Surveillance, Environmental
D005227	Fatty Acids	Organic, monobasic acids derived from hydrocarbons by the equivalent of oxidation of a methyl group to an alcohol, aldehyde, and then acid. Fatty acids are saturated and unsaturated (FATTY ACIDS, UNSATURATED). (Grant & Hackh's Chemical Dictionary, 5th ed)	Aliphatic Acid,Esterified Fatty Acid,Fatty Acid,Fatty Acids, Esterified,Fatty Acids, Saturated,Saturated Fatty Acid,Aliphatic Acids,Acid, Aliphatic,Acid, Esterified Fatty,Acid, Saturated Fatty,Esterified Fatty Acids,Fatty Acid, Esterified,Fatty Acid, Saturated,Saturated Fatty Acids
D000393	Air Pollutants	Any substance in the air which could, if present in high enough concentration, harm humans, animals, vegetation or materials. Substances include GASES; PARTICULATE MATTER; and volatile ORGANIC CHEMICALS.	Air Pollutant,Air Pollutants, Environmental,Environmental Air Pollutants,Environmental Pollutants, Air,Air Environmental Pollutants,Pollutant, Air,Pollutants, Air,Pollutants, Air Environmental,Pollutants, Environmental Air
D000818	Animals	Unicellular or multicellular, heterotrophic organisms, that have sensation and the power of voluntary movement. Under the older five kingdom paradigm, Animalia was one of the kingdoms. Under the modern three domain model, Animalia represents one of the many groups in the domain EUKARYOTA.	Animal,Metazoa,Animalia
D001419	Bacteria	One of the three domains of life (the others being Eukarya and ARCHAEA), also called Eubacteria. They are unicellular prokaryotic microorganisms which generally possess rigid cell walls, multiply by cell division, and exhibit three principal forms: round or coccal, rodlike or bacillary, and spiral or spirochetal. Bacteria can be classified by their response to OXYGEN: aerobic, anaerobic, or facultatively anaerobic; by the mode by which they obtain their energy: chemotrophy (via chemical reaction) or PHOTOTROPHY (via light reaction); for chemotrophs by their source of chemical energy: CHEMOLITHOTROPHY (from inorganic compounds) or chemoorganotrophy (from organic compounds); and by their source for CARBON; NITROGEN; etc.; HETEROTROPHY (from organic sources) or AUTOTROPHY (from CARBON DIOXIDE). They can also be classified by whether or not they stain (based on the structure of their CELL WALLS) with CRYSTAL VIOLET dye: gram-negative or gram-positive.	Eubacteria
D012621	Seasons	Divisions of the year according to some regularly recurrent phenomena usually astronomical or climatic. (From McGraw-Hill Dictionary of Scientific and Technical Terms, 6th ed)	Seasonal Variation,Season,Seasonal Variations,Variation, Seasonal,Variations, Seasonal