Segmentation of volumetric tissue images using constrained active contour models. 2003

P S Umesh Adiga
Bio-Imaging Group, MS 84-171, Lawrence Berkeley National laboratory, 1 Cyclotron Road, Berkeley, CA 94705, USA. upadiga@lbl.gov

In this article we describe an application of active contour model for the segmentation of 3D histo-pathological images. The 3D images of a thick tissue specimen are obtained as a stack of optical sections using confocal laser beam scanning microscope (CLSM). We have applied noise reduction and feature enhancement methods so that a smooth and slowly varying potential surface is obtained for proper convergence. To increase the capture range of the potential surface, we use a combination of distance potential and the diffused gradient potential as external forces. It has been shown that the region-based information obtained from low-level segmentation can be applied to reduce the adverse influence of the neighbouring nucleus having a strong boundary feature. We have also shown that, by increasing the axial resolution of the image stack, we can automatically propagate the optimum active contour of one image slice to its neighbouring image slices as an appropriate initial model. Results on images of prostate tissue section are presented.

UI MeSH Term Description Entries
D008953 Models, Anatomic Three-dimensional representation to show anatomic structures. Models may be used in place of intact animals or organisms for teaching, practice, and study. Anatomic Models,Models, Surgical,Moulages,Models, Anatomical,Anatomic Model,Anatomical Model,Anatomical Models,Model, Anatomic,Model, Anatomical,Model, Surgical,Moulage,Surgical Model,Surgical Models

Related Publications

P S Umesh Adiga
June 2006, Medical image analysis,
P S Umesh Adiga
January 2014, Computational and mathematical methods in medicine,
P S Umesh Adiga
January 2010, Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention,
P S Umesh Adiga
November 2021, Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference,
P S Umesh Adiga
January 1996, IEEE transactions on medical imaging,
Copied contents to your clipboard!