Mediator influences Schizosaccharomyces pombe RNA polymerase II-dependent transcription in vitro. 2003

Henrik Spahr, and Olga Khorosjutina, and Vera Baraznenok, and Tomas Linder, and Camilla O Samuelsen, and Damien Hermand, and Tomi P Mäkela, and Steen Holmberg, and Claes M Gustafsson
Department of Medical Nutrition, Karolinska Institute, Novum, SE-141 86 Huddinge, Sweden.

The fission yeast Schizosaccharomyces pombe has proved an important model system for cross-species comparative studies of many fundamental processes in the eukaryotic cell, such as cell cycle control and DNA replication. The RNA polymerase II transcription machinery is, however, still relatively poorly understood in S. pombe, partially due to the absence of a reconstituted in vitro transcription system. We have now purified S. pombe RNA polymerase II and its general initiation factors TFIIB, TFIIF, TFIIE, and TFIIH to near homogeneity. These factors enable RNA polymerase II to initiate transcription from the S. pombe alcohol dehydrogenase promoter (adh1p) when combined with Saccharomyces cerevisiae TATA-binding protein. We use our reconstituted system to examine effects of Mediator on basal transcription in vitro. S. pombe Mediator exists in two distinct forms, a free form, which contains the spSrb8, spTrap240, spSrb10, and spSrb11 subunits, and a smaller form, which lacks these four subunits and associates with RNA polymerase II to form a holoenzyme. We find that spSrb8/spTrap240/spSrb10/spSrb11 containing Mediator repress basal transcription, whereas Mediator lacking these subunits has a stimulatory effect on transcription. Our findings thus demonstrate that the spSrb8/spTrap240/spSrb10/spSrb11 subcomplex governs the ability of Mediator to stimulate or repress basal transcription in vitro.

UI MeSH Term Description Entries
D011401 Promoter Regions, Genetic DNA sequences which are recognized (directly or indirectly) and bound by a DNA-dependent RNA polymerase during the initiation of transcription. Highly conserved sequences within the promoter include the Pribnow box in bacteria and the TATA BOX in eukaryotes. rRNA Promoter,Early Promoters, Genetic,Late Promoters, Genetic,Middle Promoters, Genetic,Promoter Regions,Promoter, Genetic,Promotor Regions,Promotor, Genetic,Pseudopromoter, Genetic,Early Promoter, Genetic,Genetic Late Promoter,Genetic Middle Promoters,Genetic Promoter,Genetic Promoter Region,Genetic Promoter Regions,Genetic Promoters,Genetic Promotor,Genetic Promotors,Genetic Pseudopromoter,Genetic Pseudopromoters,Late Promoter, Genetic,Middle Promoter, Genetic,Promoter Region,Promoter Region, Genetic,Promoter, Genetic Early,Promoter, rRNA,Promoters, Genetic,Promoters, Genetic Middle,Promoters, rRNA,Promotor Region,Promotors, Genetic,Pseudopromoters, Genetic,Region, Genetic Promoter,Region, Promoter,Region, Promotor,Regions, Genetic Promoter,Regions, Promoter,Regions, Promotor,rRNA Promoters
D005786 Gene Expression Regulation Any of the processes by which nuclear, cytoplasmic, or intercellular factors influence the differential control (induction or repression) of gene action at the level of transcription or translation. Gene Action Regulation,Regulation of Gene Expression,Expression Regulation, Gene,Regulation, Gene Action,Regulation, Gene Expression
D000426 Alcohol Dehydrogenase A zinc-containing enzyme which oxidizes primary and secondary alcohols or hemiacetals in the presence of NAD. In alcoholic fermentation, it catalyzes the final step of reducing an aldehyde to an alcohol in the presence of NADH and hydrogen. Alcohol Dehydrogenase (NAD+),Alcohol Dehydrogenase I,Alcohol Dehydrogenase II,Alcohol-NAD+ Oxidoreductase,Yeast Alcohol Dehydrogenase,Alcohol Dehydrogenase, Yeast,Alcohol NAD+ Oxidoreductase,Dehydrogenase, Alcohol,Dehydrogenase, Yeast Alcohol,Oxidoreductase, Alcohol-NAD+
D012319 RNA Polymerase II A DNA-dependent RNA polymerase present in bacterial, plant, and animal cells. It functions in the nucleoplasmic structure and transcribes DNA into RNA. It has different requirements for cations and salt than RNA polymerase I and is strongly inhibited by alpha-amanitin. EC 2.7.7.6. DNA-Dependent RNA Polymerase II,RNA Pol II,RNA Polymerase B,DNA Dependent RNA Polymerase II
D012568 Schizosaccharomyces A genus of ascomycetous fungi of the family Schizosaccharomycetaceae, order Schizosaccharomycetales. Fission Yeast,Schizosaccharomyces malidevorans,Schizosaccharomyces pombe,Yeast, Fission,S pombe,Fission Yeasts
D014157 Transcription Factors Endogenous substances, usually proteins, which are effective in the initiation, stimulation, or termination of the genetic transcription process. Transcription Factor,Factor, Transcription,Factors, Transcription
D014158 Transcription, Genetic The biosynthesis of RNA carried out on a template of DNA. The biosynthesis of DNA from an RNA template is called REVERSE TRANSCRIPTION. Genetic Transcription
D015534 Trans-Activators Diffusible gene products that act on homologous or heterologous molecules of viral or cellular DNA to regulate the expression of proteins. Nuclear Trans-Acting Factor,Trans-Acting Factors,Trans-Acting Factor,Trans-Activator,Transactivator,Transactivators,Factor, Nuclear Trans-Acting,Factor, Trans-Acting,Factors, Trans-Acting,Nuclear Trans Acting Factor,Trans Acting Factor,Trans Acting Factors,Trans Activator,Trans Activators,Trans-Acting Factor, Nuclear
D046911 Macromolecular Substances Compounds and molecular complexes that consist of very large numbers of atoms and are generally over 500 kDa in size. In biological systems macromolecular substances usually can be visualized using ELECTRON MICROSCOPY and are distinguished from ORGANELLES by the lack of a membrane structure. Macromolecular Complexes,Macromolecular Compounds,Macromolecular Compounds and Complexes,Complexes, Macromolecular,Compounds, Macromolecular,Substances, Macromolecular
D019473 Transcription Factors, TFII The so-called general transcription factors that bind to RNA POLYMERASE II and that are required to initiate transcription. They include TFIIA; TFIIB; TFIID; TFIIE; TFIIF; TFIIH; TFII-I; and TFIIJ. In vivo they apparently bind in an ordered multi-step process and/or may form a large preinitiation complex called RNA polymerase II holoenzyme. TFII Transcription Factors

Related Publications

Henrik Spahr, and Olga Khorosjutina, and Vera Baraznenok, and Tomas Linder, and Camilla O Samuelsen, and Damien Hermand, and Tomi P Mäkela, and Steen Holmberg, and Claes M Gustafsson
January 2004, Current genetics,
Henrik Spahr, and Olga Khorosjutina, and Vera Baraznenok, and Tomas Linder, and Camilla O Samuelsen, and Damien Hermand, and Tomi P Mäkela, and Steen Holmberg, and Claes M Gustafsson
July 2018, Science (New York, N.Y.),
Henrik Spahr, and Olga Khorosjutina, and Vera Baraznenok, and Tomas Linder, and Camilla O Samuelsen, and Damien Hermand, and Tomi P Mäkela, and Steen Holmberg, and Claes M Gustafsson
July 2002, Nucleic acids research,
Henrik Spahr, and Olga Khorosjutina, and Vera Baraznenok, and Tomas Linder, and Camilla O Samuelsen, and Damien Hermand, and Tomi P Mäkela, and Steen Holmberg, and Claes M Gustafsson
June 2004, European journal of biochemistry,
Henrik Spahr, and Olga Khorosjutina, and Vera Baraznenok, and Tomas Linder, and Camilla O Samuelsen, and Damien Hermand, and Tomi P Mäkela, and Steen Holmberg, and Claes M Gustafsson
January 2000, The Journal of biological chemistry,
Henrik Spahr, and Olga Khorosjutina, and Vera Baraznenok, and Tomas Linder, and Camilla O Samuelsen, and Damien Hermand, and Tomi P Mäkela, and Steen Holmberg, and Claes M Gustafsson
April 1991, Nature,
Henrik Spahr, and Olga Khorosjutina, and Vera Baraznenok, and Tomas Linder, and Camilla O Samuelsen, and Damien Hermand, and Tomi P Mäkela, and Steen Holmberg, and Claes M Gustafsson
March 2005, Genes to cells : devoted to molecular & cellular mechanisms,
Henrik Spahr, and Olga Khorosjutina, and Vera Baraznenok, and Tomas Linder, and Camilla O Samuelsen, and Damien Hermand, and Tomi P Mäkela, and Steen Holmberg, and Claes M Gustafsson
November 1996, Gene,
Henrik Spahr, and Olga Khorosjutina, and Vera Baraznenok, and Tomas Linder, and Camilla O Samuelsen, and Damien Hermand, and Tomi P Mäkela, and Steen Holmberg, and Claes M Gustafsson
January 1991, Methods in enzymology,
Henrik Spahr, and Olga Khorosjutina, and Vera Baraznenok, and Tomas Linder, and Camilla O Samuelsen, and Damien Hermand, and Tomi P Mäkela, and Steen Holmberg, and Claes M Gustafsson
October 2009, FEBS letters,
Copied contents to your clipboard!