Three hexahydropyridopyrimidine-spiro-cyclohexanetriones: supramolecular structures generated by O-H...O, N-H...O, C-H...O and C-H...pi hydrogen bonds, and pi-pi stacking interactions. 2004

John N Low, and George Ferguson, and Justo Cobo, and Manuel Nogueras, and Silvia Cruz, and Jairo Quiroga, and Christopher Glidewell
Department of Chemistry, University of Aberdeen, Meston Walk, Old Aberdeen AB24 3UE, Scotland.

4',4'-Dimethyl-2-methylsulfanyl-3,4,5,6,7,8-hexahydropyrido[2,3-d]pyrimidine-6-spiro-1'-cyclohexane-2',4,6'-trione, C(15)H(19)N(3)O(3)S, (I), has a markedly polarized molecular-electronic structure, and the molecules are linked into a three-dimensional framework by a combination of N-H.O, C-H.O and C-H.pi hydrogen bonds. 8-Hydroxymethyl-4',4'-dimethyl-2-methylsulfanyl-3,4,5,6,7,8-hexahydropyrido[2,3-d]pyrimidine-6-spiro-1'-cyclohexane-2',4,6'-trione, C(16)H(21)N(3)O(4)S, (II), where the hydroxymethyl substituent is disordered over two sets of sites, has a much less polarized structure than (I); the molecules are linked by a combination of O-H.O and N-H.O hydrogen bonds into chains containing alternating R(2)(2)(8) and R(2)(2)(16) rings, and these chains are linked into sheets by a combination of a pi-pi stacking interaction and a C-H.O hydrogen bond. 8-Ethoxymethyl-2-methoxy-4',4'-dimethyl-3,4,5,6,7,8-hexahydropyrido[2,3-d]pyrimidine-6-spiro-1'-cyclohexane-2',4,6'-trione, C(18)H(25)N(3)O(5), (III), has an unpolarized electronic structure, and a combination of N-H.O, C-H.O and C-H.pi hydrogen bonds links the molecules into sheets.

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