Thermophilic bacterial DNA polymerases with reverse-transcriptase activity. 2004

Harini Shandilya, and Kate Griffiths, and Elizabeth K Flynn, and Mekbib Astatke, and Po-Jen Shih, and Jun E Lee, and Gary F Gerard, and Moreland D Gibbs, and Peter L Bergquist
Invitrogen Corporation, 1600 Faraday Avenue, Carlsbad, CA 92008, USA.

Conserved motifs found in known bacterial polI DNA polymerase sequences were identified, and degenerate PCR primers were designed for PCR amplification of an internal portion of polI genes from all bacterial divisions. We describe here a method that has allowed the rapid identification and isolation of 13 polI genes from a diverse selection of thermophilic bacteria and report on the biochemical characteristics of nine of the purified recombinant enzymes. Several enzymes showed significant reverse-transcriptase activity in the presence of Mg2+, particularly the polymerases from Bacillus caldolyticus EA1, Caldibacillus cellovorans CompA.2, and Clostridium stercorarium.

UI MeSH Term Description Entries
D007700 Kinetics The rate dynamics in chemical or physical systems.
D008274 Magnesium A metallic element that has the atomic symbol Mg, atomic number 12, and atomic weight 24.31. It is important for the activity of many enzymes, especially those involved in OXIDATIVE PHOSPHORYLATION.
D008969 Molecular Sequence Data Descriptions of specific amino acid, carbohydrate, or nucleotide sequences which have appeared in the published literature and/or are deposited in and maintained by databanks such as GENBANK, European Molecular Biology Laboratory (EMBL), National Biomedical Research Foundation (NBRF), or other sequence repositories. Sequence Data, Molecular,Molecular Sequencing Data,Data, Molecular Sequence,Data, Molecular Sequencing,Sequencing Data, Molecular
D011994 Recombinant Proteins Proteins prepared by recombinant DNA technology. Biosynthetic Protein,Biosynthetic Proteins,DNA Recombinant Proteins,Recombinant Protein,Proteins, Biosynthetic,Proteins, Recombinant DNA,DNA Proteins, Recombinant,Protein, Biosynthetic,Protein, Recombinant,Proteins, DNA Recombinant,Proteins, Recombinant,Recombinant DNA Proteins,Recombinant Proteins, DNA
D003001 Cloning, Molecular The insertion of recombinant DNA molecules from prokaryotic and/or eukaryotic sources into a replicating vehicle, such as a plasmid or virus vector, and the introduction of the resultant hybrid molecules into recipient cells without altering the viability of those cells. Molecular Cloning
D003013 Clostridium A genus of motile or nonmotile gram-positive bacteria of the family Clostridiaceae. Many species have been identified with some being pathogenic. They occur in water, soil, and in the intestinal tract of humans and lower animals.
D004256 DNA Polymerase I A DNA-dependent DNA polymerase characterized in prokaryotes and may be present in higher organisms. It has both 3'-5' and 5'-3' exonuclease activity, but cannot use native double-stranded DNA as template-primer. It is not inhibited by sulfhydryl reagents and is active in both DNA synthesis and repair. DNA Polymerase alpha,DNA-Dependent DNA Polymerase I,Klenow Fragment,DNA Pol I,DNA Dependent DNA Polymerase I,Polymerase alpha, DNA
D004269 DNA, Bacterial Deoxyribonucleic acid that makes up the genetic material of bacteria. Bacterial DNA
D004795 Enzyme Stability The extent to which an enzyme retains its structural conformation or its activity when subjected to storage, isolation, and purification or various other physical or chemical manipulations, including proteolytic enzymes and heat. Enzyme Stabilities,Stabilities, Enzyme,Stability, Enzyme
D005798 Genes, Bacterial The functional hereditary units of BACTERIA. Bacterial Gene,Bacterial Genes,Gene, Bacterial

Related Publications

Harini Shandilya, and Kate Griffiths, and Elizabeth K Flynn, and Mekbib Astatke, and Po-Jen Shih, and Jun E Lee, and Gary F Gerard, and Moreland D Gibbs, and Peter L Bergquist
October 2012, Biochemical and biophysical research communications,
Harini Shandilya, and Kate Griffiths, and Elizabeth K Flynn, and Mekbib Astatke, and Po-Jen Shih, and Jun E Lee, and Gary F Gerard, and Moreland D Gibbs, and Peter L Bergquist
October 2006, Biochemistry,
Harini Shandilya, and Kate Griffiths, and Elizabeth K Flynn, and Mekbib Astatke, and Po-Jen Shih, and Jun E Lee, and Gary F Gerard, and Moreland D Gibbs, and Peter L Bergquist
October 1996, BioTechniques,
Harini Shandilya, and Kate Griffiths, and Elizabeth K Flynn, and Mekbib Astatke, and Po-Jen Shih, and Jun E Lee, and Gary F Gerard, and Moreland D Gibbs, and Peter L Bergquist
January 1990, Annals of the New York Academy of Sciences,
Harini Shandilya, and Kate Griffiths, and Elizabeth K Flynn, and Mekbib Astatke, and Po-Jen Shih, and Jun E Lee, and Gary F Gerard, and Moreland D Gibbs, and Peter L Bergquist
June 2023, Analytical biochemistry,
Harini Shandilya, and Kate Griffiths, and Elizabeth K Flynn, and Mekbib Astatke, and Po-Jen Shih, and Jun E Lee, and Gary F Gerard, and Moreland D Gibbs, and Peter L Bergquist
September 1971, Proceedings of the National Academy of Sciences of the United States of America,
Harini Shandilya, and Kate Griffiths, and Elizabeth K Flynn, and Mekbib Astatke, and Po-Jen Shih, and Jun E Lee, and Gary F Gerard, and Moreland D Gibbs, and Peter L Bergquist
May 2017, Biochemical and biophysical research communications,
Harini Shandilya, and Kate Griffiths, and Elizabeth K Flynn, and Mekbib Astatke, and Po-Jen Shih, and Jun E Lee, and Gary F Gerard, and Moreland D Gibbs, and Peter L Bergquist
July 2021, Current protocols,
Harini Shandilya, and Kate Griffiths, and Elizabeth K Flynn, and Mekbib Astatke, and Po-Jen Shih, and Jun E Lee, and Gary F Gerard, and Moreland D Gibbs, and Peter L Bergquist
April 1997, Bioorganicheskaia khimiia,
Harini Shandilya, and Kate Griffiths, and Elizabeth K Flynn, and Mekbib Astatke, and Po-Jen Shih, and Jun E Lee, and Gary F Gerard, and Moreland D Gibbs, and Peter L Bergquist
April 2018, Nucleic acids research,
Copied contents to your clipboard!