Segmentation in virtual colonoscopy using a geometric deformable model. 2006

Christopher L Wyatt, and Yaorong Ge, and David J Vining
Wake Forest University School of Medicine, Medical Centre Boulevard, Winston-Salem, NC, USA. cwyatt@wfubmn.edu

The Geometric Deformable Model is developed for accurate colon lumen segmentation as part of an automatic Virtual Colonoscopy system. The deformable model refines the lumen surface found by an automatic seed location and thresholding procedure. The challenges to applying the deformable model are described, showing the definition of the stopping function as the key to accurate segmentation. The limitations of current stopping criteria are examined and a new definition, tailored to the task of colon segmentation, is given. First, a multiscale edge operator is used to locate high confidence boundaries. These boundaries are then integrated into the stopping function using a distance transform. The hypothesis is that the new stopping function results in a more accurate representation of the lumen surface compared to previous monotonic functions of the gradient magnitude. This hypothesis is tested using observer ratings of colon surface fidelity at 100,000 randomly selected locations in each of four datasets. The results show that the surfaces determined by the modified deformable model better represent the lumen surface overall.

UI MeSH Term Description Entries
D008953 Models, Anatomic Three-dimensional representation to show anatomic structures. Models may be used in place of intact animals or organisms for teaching, practice, and study. Anatomic Models,Models, Surgical,Moulages,Models, Anatomical,Anatomic Model,Anatomical Model,Anatomical Models,Model, Anatomic,Model, Anatomical,Model, Surgical,Moulage,Surgical Model,Surgical Models
D006801 Humans Members of the species Homo sapiens. Homo sapiens,Man (Taxonomy),Human,Man, Modern,Modern Man
D000465 Algorithms A procedure consisting of a sequence of algebraic formulas and/or logical steps to calculate or determine a given task. Algorithm
D014481 United States A country in NORTH AMERICA between CANADA and MEXICO.
D021621 Imaging, Three-Dimensional The process of generating three-dimensional images by electronic, photographic, or other methods. For example, three-dimensional images can be generated by assembling multiple tomographic images with the aid of a computer, while photographic 3-D images (HOLOGRAPHY) can be made by exposing film to the interference pattern created when two laser light sources shine on an object. Computer-Assisted Three-Dimensional Imaging,Imaging, Three-Dimensional, Computer Assisted,3-D Image,3-D Imaging,Computer-Generated 3D Imaging,Three-Dimensional Image,Three-Dimensional Imaging, Computer Generated,3 D Image,3 D Imaging,3-D Images,3-D Imagings,3D Imaging, Computer-Generated,3D Imagings, Computer-Generated,Computer Assisted Three Dimensional Imaging,Computer Generated 3D Imaging,Computer-Assisted Three-Dimensional Imagings,Computer-Generated 3D Imagings,Image, 3-D,Image, Three-Dimensional,Images, 3-D,Images, Three-Dimensional,Imaging, 3-D,Imaging, Computer-Assisted Three-Dimensional,Imaging, Computer-Generated 3D,Imaging, Three Dimensional,Imagings, 3-D,Imagings, Computer-Assisted Three-Dimensional,Imagings, Computer-Generated 3D,Imagings, Three-Dimensional,Three Dimensional Image,Three Dimensional Imaging, Computer Generated,Three-Dimensional Images,Three-Dimensional Imaging,Three-Dimensional Imaging, Computer-Assisted,Three-Dimensional Imagings,Three-Dimensional Imagings, Computer-Assisted
D023881 Colonography, Computed Tomographic A non-invasive imaging method that uses computed tomographic data combined with specialized imaging software to examine the colon. Colonoscopy, Virtual,Computed Tomographic Colonography,Virtual Colonoscopy,CT Colonography,Colonography, CT

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