Performance and quality assurance of genotypic drug-resistance testing for human immunodeficiency virus type 1 in Japan. 2007

Seiichiro Fujisaki, and Saeko Fujisaki, and Shiro Ibe, and Tsukasa Asagi, and Toshihiro Itoh, and Shigeru Yoshida, and Takao Koike, and Masayasu Oie, and Makiko Konda, and Kenji Sadamasu, and Mami Nagashima, and Hiroyuki Gatanaga, and Masakazu Matsuda, and Mikio Ueda, and Aki Masakane, and Mami Hata, and Yasushi Mizogami, and Haruyo Mori, and Rumi Minami, and Kiyomi Okada, and Kanako Watanabe, and Takuma Shirasaka, and Shinichi Oka, and Wataru Sugiura, and Tsuguhiro Kaneda
National Hospital Organization Nagoya Medical Center, Aichi 460-0001, Japan.

Highly active antiretroviral therapy (HAART) can suppress human immunodeficiency virus type 1 (HIV-1) replication and plasma HIV-1 to below detectable levels. However, HAART becomes ineffective when drug-resistant viruses emerge during HAART. Monitoring drug-resistance mutations in viruses is necessary for selecting new drugs or therapies effective at inhibiting such HIV-1 variants. Most laboratories in Japan perform the tests using in-house protocols. However, the quality of these tests has never been assessed. Our study assessing the accuracy and reliability of HIV-1 genotypic drug-resistance testing in 15 laboratories in Japan revealed that the quality was very high (97.3% accurate). The errors, though rare, were caused by human errors, poor electropherograms, and the use of inadequate primers. Here, we propose troubleshooting procedures to improve testing accuracy and reliability in Japan.

UI MeSH Term Description Entries
D007564 Japan A country in eastern Asia, island chain between the North Pacific Ocean and the Sea of Japan, east of the Korean Peninsula. The capital is Tokyo. Bonin Islands
D007753 Laboratories Facilities equipped to carry out investigative procedures. Laboratory
D008826 Microbial Sensitivity Tests Any tests that demonstrate the relative efficacy of different chemotherapeutic agents against specific microorganisms (i.e., bacteria, fungi, viruses). Bacterial Sensitivity Tests,Drug Sensitivity Assay, Microbial,Minimum Inhibitory Concentration,Antibacterial Susceptibility Breakpoint Determination,Antibiogram,Antimicrobial Susceptibility Breakpoint Determination,Bacterial Sensitivity Test,Breakpoint Determination, Antibacterial Susceptibility,Breakpoint Determination, Antimicrobial Susceptibility,Fungal Drug Sensitivity Tests,Fungus Drug Sensitivity Tests,Sensitivity Test, Bacterial,Sensitivity Tests, Bacterial,Test, Bacterial Sensitivity,Tests, Bacterial Sensitivity,Viral Drug Sensitivity Tests,Virus Drug Sensitivity Tests,Antibiograms,Concentration, Minimum Inhibitory,Concentrations, Minimum Inhibitory,Inhibitory Concentration, Minimum,Inhibitory Concentrations, Minimum,Microbial Sensitivity Test,Minimum Inhibitory Concentrations,Sensitivity Test, Microbial,Sensitivity Tests, Microbial,Test, Microbial Sensitivity,Tests, Microbial Sensitivity
D011786 Quality Control A system for verifying and maintaining a desired level of quality in a product or process by careful planning, use of proper equipment, continued inspection, and corrective action as required. (Random House Unabridged Dictionary, 2d ed) Control, Quality,Controls, Quality,Quality Controls
D005838 Genotype The genetic constitution of the individual, comprising the ALLELES present at each GENETIC LOCUS. Genogroup,Genogroups,Genotypes
D006801 Humans Members of the species Homo sapiens. Homo sapiens,Man (Taxonomy),Human,Man, Modern,Modern Man
D012367 RNA, Viral Ribonucleic acid that makes up the genetic material of viruses. Viral RNA
D013048 Specimen Handling Procedures for collecting, preserving, and transporting of specimens sufficiently stable to provide accurate and precise results suitable for clinical interpretation. Specimen Collection,Collection, Specimen,Collections, Specimen,Handling, Specimen,Handlings, Specimen,Specimen Collections,Specimen Handlings
D015203 Reproducibility of Results The statistical reproducibility of measurements (often in a clinical context), including the testing of instrumentation or techniques to obtain reproducible results. The concept includes reproducibility of physiological measurements, which may be used to develop rules to assess probability or prognosis, or response to a stimulus; reproducibility of occurrence of a condition; and reproducibility of experimental results. Reliability and Validity,Reliability of Result,Reproducibility Of Result,Reproducibility of Finding,Validity of Result,Validity of Results,Face Validity,Reliability (Epidemiology),Reliability of Results,Reproducibility of Findings,Test-Retest Reliability,Validity (Epidemiology),Finding Reproducibilities,Finding Reproducibility,Of Result, Reproducibility,Of Results, Reproducibility,Reliabilities, Test-Retest,Reliability, Test-Retest,Result Reliabilities,Result Reliability,Result Validities,Result Validity,Result, Reproducibility Of,Results, Reproducibility Of,Test Retest Reliability,Validity and Reliability,Validity, Face
D015497 HIV-1 The type species of LENTIVIRUS and the etiologic agent of AIDS. It is characterized by its cytopathic effect and affinity for the T4-lymphocyte. Human immunodeficiency virus 1,HIV-I,Human Immunodeficiency Virus Type 1,Immunodeficiency Virus Type 1, Human

Related Publications

Seiichiro Fujisaki, and Saeko Fujisaki, and Shiro Ibe, and Tsukasa Asagi, and Toshihiro Itoh, and Shigeru Yoshida, and Takao Koike, and Masayasu Oie, and Makiko Konda, and Kenji Sadamasu, and Mami Nagashima, and Hiroyuki Gatanaga, and Masakazu Matsuda, and Mikio Ueda, and Aki Masakane, and Mami Hata, and Yasushi Mizogami, and Haruyo Mori, and Rumi Minami, and Kiyomi Okada, and Kanako Watanabe, and Takuma Shirasaka, and Shinichi Oka, and Wataru Sugiura, and Tsuguhiro Kaneda
April 2002, Clinical microbiology reviews,
Seiichiro Fujisaki, and Saeko Fujisaki, and Shiro Ibe, and Tsukasa Asagi, and Toshihiro Itoh, and Shigeru Yoshida, and Takao Koike, and Masayasu Oie, and Makiko Konda, and Kenji Sadamasu, and Mami Nagashima, and Hiroyuki Gatanaga, and Masakazu Matsuda, and Mikio Ueda, and Aki Masakane, and Mami Hata, and Yasushi Mizogami, and Haruyo Mori, and Rumi Minami, and Kiyomi Okada, and Kanako Watanabe, and Takuma Shirasaka, and Shinichi Oka, and Wataru Sugiura, and Tsuguhiro Kaneda
November 2006, Proceedings of the National Academy of Sciences of the United States of America,
Seiichiro Fujisaki, and Saeko Fujisaki, and Shiro Ibe, and Tsukasa Asagi, and Toshihiro Itoh, and Shigeru Yoshida, and Takao Koike, and Masayasu Oie, and Makiko Konda, and Kenji Sadamasu, and Mami Nagashima, and Hiroyuki Gatanaga, and Masakazu Matsuda, and Mikio Ueda, and Aki Masakane, and Mami Hata, and Yasushi Mizogami, and Haruyo Mori, and Rumi Minami, and Kiyomi Okada, and Kanako Watanabe, and Takuma Shirasaka, and Shinichi Oka, and Wataru Sugiura, and Tsuguhiro Kaneda
March 1990, Archives of pathology & laboratory medicine,
Seiichiro Fujisaki, and Saeko Fujisaki, and Shiro Ibe, and Tsukasa Asagi, and Toshihiro Itoh, and Shigeru Yoshida, and Takao Koike, and Masayasu Oie, and Makiko Konda, and Kenji Sadamasu, and Mami Nagashima, and Hiroyuki Gatanaga, and Masakazu Matsuda, and Mikio Ueda, and Aki Masakane, and Mami Hata, and Yasushi Mizogami, and Haruyo Mori, and Rumi Minami, and Kiyomi Okada, and Kanako Watanabe, and Takuma Shirasaka, and Shinichi Oka, and Wataru Sugiura, and Tsuguhiro Kaneda
November 2003, Journal of clinical microbiology,
Seiichiro Fujisaki, and Saeko Fujisaki, and Shiro Ibe, and Tsukasa Asagi, and Toshihiro Itoh, and Shigeru Yoshida, and Takao Koike, and Masayasu Oie, and Makiko Konda, and Kenji Sadamasu, and Mami Nagashima, and Hiroyuki Gatanaga, and Masakazu Matsuda, and Mikio Ueda, and Aki Masakane, and Mami Hata, and Yasushi Mizogami, and Haruyo Mori, and Rumi Minami, and Kiyomi Okada, and Kanako Watanabe, and Takuma Shirasaka, and Shinichi Oka, and Wataru Sugiura, and Tsuguhiro Kaneda
February 2007, Journal of clinical microbiology,
Seiichiro Fujisaki, and Saeko Fujisaki, and Shiro Ibe, and Tsukasa Asagi, and Toshihiro Itoh, and Shigeru Yoshida, and Takao Koike, and Masayasu Oie, and Makiko Konda, and Kenji Sadamasu, and Mami Nagashima, and Hiroyuki Gatanaga, and Masakazu Matsuda, and Mikio Ueda, and Aki Masakane, and Mami Hata, and Yasushi Mizogami, and Haruyo Mori, and Rumi Minami, and Kiyomi Okada, and Kanako Watanabe, and Takuma Shirasaka, and Shinichi Oka, and Wataru Sugiura, and Tsuguhiro Kaneda
January 2005, Journal of virological methods,
Seiichiro Fujisaki, and Saeko Fujisaki, and Shiro Ibe, and Tsukasa Asagi, and Toshihiro Itoh, and Shigeru Yoshida, and Takao Koike, and Masayasu Oie, and Makiko Konda, and Kenji Sadamasu, and Mami Nagashima, and Hiroyuki Gatanaga, and Masakazu Matsuda, and Mikio Ueda, and Aki Masakane, and Mami Hata, and Yasushi Mizogami, and Haruyo Mori, and Rumi Minami, and Kiyomi Okada, and Kanako Watanabe, and Takuma Shirasaka, and Shinichi Oka, and Wataru Sugiura, and Tsuguhiro Kaneda
June 2001, Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology,
Seiichiro Fujisaki, and Saeko Fujisaki, and Shiro Ibe, and Tsukasa Asagi, and Toshihiro Itoh, and Shigeru Yoshida, and Takao Koike, and Masayasu Oie, and Makiko Konda, and Kenji Sadamasu, and Mami Nagashima, and Hiroyuki Gatanaga, and Masakazu Matsuda, and Mikio Ueda, and Aki Masakane, and Mami Hata, and Yasushi Mizogami, and Haruyo Mori, and Rumi Minami, and Kiyomi Okada, and Kanako Watanabe, and Takuma Shirasaka, and Shinichi Oka, and Wataru Sugiura, and Tsuguhiro Kaneda
February 2000, Pharmacotherapy,
Seiichiro Fujisaki, and Saeko Fujisaki, and Shiro Ibe, and Tsukasa Asagi, and Toshihiro Itoh, and Shigeru Yoshida, and Takao Koike, and Masayasu Oie, and Makiko Konda, and Kenji Sadamasu, and Mami Nagashima, and Hiroyuki Gatanaga, and Masakazu Matsuda, and Mikio Ueda, and Aki Masakane, and Mami Hata, and Yasushi Mizogami, and Haruyo Mori, and Rumi Minami, and Kiyomi Okada, and Kanako Watanabe, and Takuma Shirasaka, and Shinichi Oka, and Wataru Sugiura, and Tsuguhiro Kaneda
February 2004, Medicina clinica,
Seiichiro Fujisaki, and Saeko Fujisaki, and Shiro Ibe, and Tsukasa Asagi, and Toshihiro Itoh, and Shigeru Yoshida, and Takao Koike, and Masayasu Oie, and Makiko Konda, and Kenji Sadamasu, and Mami Nagashima, and Hiroyuki Gatanaga, and Masakazu Matsuda, and Mikio Ueda, and Aki Masakane, and Mami Hata, and Yasushi Mizogami, and Haruyo Mori, and Rumi Minami, and Kiyomi Okada, and Kanako Watanabe, and Takuma Shirasaka, and Shinichi Oka, and Wataru Sugiura, and Tsuguhiro Kaneda
September 1999, Journal of clinical microbiology,
Copied contents to your clipboard!