Evolution of allosteric models for hemoglobin. 2007

William A Eaton, and Eric R Henry, and James Hofrichter, and Stefano Bettati, and Cristiano Viappiani, and Andrea Mozzarelli
Laboratory of Chemical Physics, National Institute of Diabetes, Digestive and Kidney Diseases, National Institutes of Health, Bethesda, Maryland 20892-0520, USA. eaton@helix.nih.gov

We compare various allosteric models that have been proposed to explain cooperative oxygen binding to hemoglobin, including the two-state allosteric model of Monod, Wyman, and Changeux (MWC), the Cooperon model of Brunori, the model of Szabo and Karplus (SK) based on the stereochemical mechanism of Perutz, the generalization of the SK model by Lee and Karplus (SKL), and the Tertiary Two-State (TTS) model of Henry, Bettati, Hofrichter and Eaton. The preponderance of experimental evidence favors the TTS model which postulates an equilibrium between high (r)- and low (t)-affinity tertiary conformations that are present in both the T and R quaternary structures. Cooperative oxygenation in this model arises from the shift of T to R, as in MWC, but with a significant population of both r and t conformations in the liganded T and in the unliganded R quaternary structures. The TTS model may be considered a combination of the SK and SKL models, and these models provide a framework for a structural interpretation of the TTS parameters. The most compelling evidence in favor of the TTS model is the nanosecond - millisecond carbon monoxide (CO) rebinding kinetics in photodissociation experiments on hemoglobin encapsulated in silica gels. The polymeric network of the gel prevents any tertiary or quaternary conformational changes on the sub-second time scale, thereby permitting the subunit conformations prior to CO photodissociation to be determined from their ligand rebinding kinetics. These experiments show that a large fraction of liganded subunits in the T quaternary structure have the same functional conformation as liganded subunits in the R quaternary structure, an experimental finding inconsistent with the MWC, Cooperon, SK, and SKL models, but readily explained by the TTS model as rebinding to r subunits in T. We propose an additional experiment to test another key prediction of the TTS model, namely that a fraction of subunits in the unliganded R quaternary structure has the same functional conformation (t) as unliganded subunits in the T quaternary structure.

UI MeSH Term Description Entries
D008958 Models, Molecular Models used experimentally or theoretically to study molecular shape, electronic properties, or interactions; includes analogous molecules, computer-generated graphics, and mechanical structures. Molecular Models,Model, Molecular,Molecular Model
D006454 Hemoglobins The oxygen-carrying proteins of ERYTHROCYTES. They are found in all vertebrates and some invertebrates. The number of globin subunits in the hemoglobin quaternary structure differs between species. Structures range from monomeric to a variety of multimeric arrangements. Eryhem,Ferrous Hemoglobin,Hemoglobin,Hemoglobin, Ferrous
D000494 Allosteric Regulation The modification of the reactivity of ENZYMES by the binding of effectors to sites (ALLOSTERIC SITES) on the enzymes other than the substrate BINDING SITES. Regulation, Allosteric,Allosteric Regulations,Regulations, Allosteric
D019143 Evolution, Molecular The process of cumulative change at the level of DNA; RNA; and PROTEINS, over successive generations. Molecular Evolution,Genetic Evolution,Evolution, Genetic

Related Publications

William A Eaton, and Eric R Henry, and James Hofrichter, and Stefano Bettati, and Cristiano Viappiani, and Andrea Mozzarelli
January 1968, Biopolymers,
William A Eaton, and Eric R Henry, and James Hofrichter, and Stefano Bettati, and Cristiano Viappiani, and Andrea Mozzarelli
March 2023, Biomolecules,
William A Eaton, and Eric R Henry, and James Hofrichter, and Stefano Bettati, and Cristiano Viappiani, and Andrea Mozzarelli
January 1973, International journal of peptide and protein research,
William A Eaton, and Eric R Henry, and James Hofrichter, and Stefano Bettati, and Cristiano Viappiani, and Andrea Mozzarelli
October 1986, Biophysical journal,
William A Eaton, and Eric R Henry, and James Hofrichter, and Stefano Bettati, and Cristiano Viappiani, and Andrea Mozzarelli
January 2023, Current biology : CB,
William A Eaton, and Eric R Henry, and James Hofrichter, and Stefano Bettati, and Cristiano Viappiani, and Andrea Mozzarelli
January 1972, Cold Spring Harbor symposia on quantitative biology,
William A Eaton, and Eric R Henry, and James Hofrichter, and Stefano Bettati, and Cristiano Viappiani, and Andrea Mozzarelli
January 2018, Current protein & peptide science,
William A Eaton, and Eric R Henry, and James Hofrichter, and Stefano Bettati, and Cristiano Viappiani, and Andrea Mozzarelli
February 2020, Biochimica et biophysica acta. General subjects,
William A Eaton, and Eric R Henry, and James Hofrichter, and Stefano Bettati, and Cristiano Viappiani, and Andrea Mozzarelli
December 1974, Biophysical chemistry,
William A Eaton, and Eric R Henry, and James Hofrichter, and Stefano Bettati, and Cristiano Viappiani, and Andrea Mozzarelli
June 2023, Accounts of chemical research,
Copied contents to your clipboard!