Draft genome of the filarial nematode parasite Brugia malayi. 2007

Elodie Ghedin, and Shiliang Wang, and David Spiro, and Elisabet Caler, and Qi Zhao, and Jonathan Crabtree, and Jonathan E Allen, and Arthur L Delcher, and David B Guiliano, and Diego Miranda-Saavedra, and Samuel V Angiuoli, and Todd Creasy, and Paolo Amedeo, and Brian Haas, and Najib M El-Sayed, and Jennifer R Wortman, and Tamara Feldblyum, and Luke Tallon, and Michael Schatz, and Martin Shumway, and Hean Koo, and Steven L Salzberg, and Seth Schobel, and Mihaela Pertea, and Mihai Pop, and Owen White, and Geoffrey J Barton, and Clotilde K S Carlow, and Michael J Crawford, and Jennifer Daub, and Matthew W Dimmic, and Chris F Estes, and Jeremy M Foster, and Mehul Ganatra, and William F Gregory, and Nicholas M Johnson, and Jinming Jin, and Richard Komuniecki, and Ian Korf, and Sanjay Kumar, and Sandra Laney, and Ben-Wen Li, and Wen Li, and Tim H Lindblom, and Sara Lustigman, and Dong Ma, and Claude V Maina, and David M A Martin, and James P McCarter, and Larry McReynolds, and Makedonka Mitreva, and Thomas B Nutman, and John Parkinson, and José M Peregrín-Alvarez, and Catherine Poole, and Qinghu Ren, and Lori Saunders, and Ann E Sluder, and Katherine Smith, and Mario Stanke, and Thomas R Unnasch, and Jenna Ware, and Aguan D Wei, and Gary Weil, and Deryck J Williams, and Yinhua Zhang, and Steven A Williams, and Claire Fraser-Liggett, and Barton Slatko, and Mark L Blaxter, and Alan L Scott
Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA. GhedinE@dom.pitt.edu

Parasitic nematodes that cause elephantiasis and river blindness threaten hundreds of millions of people in the developing world. We have sequenced the approximately 90 megabase (Mb) genome of the human filarial parasite Brugia malayi and predict approximately 11,500 protein coding genes in 71 Mb of robustly assembled sequence. Comparative analysis with the free-living, model nematode Caenorhabditis elegans revealed that, despite these genes having maintained little conservation of local synteny during approximately 350 million years of evolution, they largely remain in linkage on chromosomal units. More than 100 conserved operons were identified. Analysis of the predicted proteome provides evidence for adaptations of B. malayi to niches in its human and vector hosts and insights into the molecular basis of a mutualistic relationship with its Wolbachia endosymbiont. These findings offer a foundation for rational drug design.

UI MeSH Term Description Entries
D008969 Molecular Sequence Data Descriptions of specific amino acid, carbohydrate, or nucleotide sequences which have appeared in the published literature and/or are deposited in and maintained by databanks such as GENBANK, European Molecular Biology Laboratory (EMBL), National Biomedical Research Foundation (NBRF), or other sequence repositories. Sequence Data, Molecular,Molecular Sequencing Data,Data, Molecular Sequence,Data, Molecular Sequencing,Sequencing Data, Molecular
D002107 Caenorhabditis A genus of small free-living nematodes. Two species, CAENORHABDITIS ELEGANS and C. briggsae are much used in studies of genetics, development, aging, muscle chemistry, and neuroanatomy. Caenorhabditides
D004331 Drosophila melanogaster A species of fruit fly frequently used in genetics because of the large size of its chromosomes. D. melanogaster,Drosophila melanogasters,melanogaster, Drosophila
D004351 Drug Resistance Diminished or failed response of an organism, disease or tissue to the intended effectiveness of a chemical or drug. It should be differentiated from DRUG TOLERANCE which is the progressive diminution of the susceptibility of a human or animal to the effects of a drug, as a result of continued administration. Resistance, Drug
D005368 Filariasis Infections with nematodes of the superfamily FILARIOIDEA. The presence of living worms in the body is mainly asymptomatic but the death of adult worms leads to granulomatous inflammation and permanent fibrosis. Organisms of the genus Elaeophora infect wild elk and domestic sheep causing ischemic necrosis of the brain, blindness, and dermatosis of the face. Elaeophoriasis,Filarioidea Infections,Infections, Filarioidea,Elaeophoriases,Filariases,Filarioidea Infection,Infection, Filarioidea
D006801 Humans Members of the species Homo sapiens. Homo sapiens,Man (Taxonomy),Human,Man, Modern,Modern Man
D000818 Animals Unicellular or multicellular, heterotrophic organisms, that have sensation and the power of voluntary movement. Under the older five kingdom paradigm, Animalia was one of the kingdoms. Under the modern three domain model, Animalia represents one of the many groups in the domain EUKARYOTA. Animal,Metazoa,Animalia
D017178 Brugia malayi A species of parasitic nematode causing Malayan filariasis and having a distribution centering roughly on the Malay peninsula. The life cycle of B. malayi is similar to that of WUCHERERIA BANCROFTI, except that in most areas the principal mosquito vectors belong to the genus Mansonia. Brugia malayus,malayi, Brugia
D049751 Genome, Helminth The genetic complement of a helminth (HELMINTHS) as represented in its DNA. Helminth Genome,Genomes, Helminth,Helminth Genomes

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