3-Deoxy-beta-D-ribo-hexopyranose (3-deoxy-beta-D-glucopyranose). 2007

Wenhui Zhang, and Bruce C Noll, and Anthony S Serianni
University of Notre Dame, Department of Chemistry and Biochemistry, 251 Nieuwland Science Hall, Notre Dame, IN 46556-5670, USA.

The beta-pyranose form, (III), of 3-deoxy-D-ribo-hexose (3-deoxy-D-glucose), C(6)H(12)O(5), crystallizes from water at 298 K in a slightly distorted (4)C(1) chair conformation. Structural analyses of (III), beta-D-glucopyranose, (IV), and 2-deoxy-beta-D-arabino-hexopyranose (2-deoxy-beta-D-glucopyranose), (V), show significantly different C-O bond torsions involving the anomeric carbon, with the H-C-O-H torsion angle approaching an eclipsed conformation in (III) (-10.9 degrees ) compared with 32.8 and 32.5 degrees in (IV) and (V), respectively. Ring carbon deoxygenation significantly affects the endo- and exocyclic C-C and C-O bond lengths throughout the pyranose ring, with longer bonds generally observed in the monodeoxygenated species (III) and (V) compared with (IV). These structural changes are attributed to differences in exocyclic C-O bond conformations and/or hydrogen-bonding patterns superimposed on the direct (intrinsic) effect of monodeoxygenation. The exocyclic hydroxymethyl conformation in (III) (gt) differs from that observed in (IV) and (V) (gg).

UI MeSH Term Description Entries
D008958 Models, Molecular Models used experimentally or theoretically to study molecular shape, electronic properties, or interactions; includes analogous molecules, computer-generated graphics, and mechanical structures. Molecular Models,Model, Molecular,Molecular Model
D003847 Deoxyglucose 2-Deoxy-D-arabino-hexose. An antimetabolite of glucose with antiviral activity. 2-Deoxy-D-glucose,2-Deoxyglucose,2-Desoxy-D-glucose,2 Deoxy D glucose,2 Deoxyglucose,2 Desoxy D glucose
D006860 Hydrogen Bonding A low-energy attractive force between hydrogen and another element. It plays a major role in determining the properties of water, proteins, and other compounds. Hydrogen Bonds,Bond, Hydrogen,Hydrogen Bond
D015394 Molecular Structure The location of the atoms, groups or ions relative to one another in a molecule, as well as the number, type and location of covalent bonds. Structure, Molecular,Molecular Structures,Structures, Molecular
D018360 Crystallography, X-Ray The study of crystal structure using X-RAY DIFFRACTION techniques. (McGraw-Hill Dictionary of Scientific and Technical Terms, 4th ed) X-Ray Crystallography,Crystallography, X Ray,Crystallography, Xray,X Ray Crystallography,Xray Crystallography,Crystallographies, X Ray,X Ray Crystallographies

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