Oligomeric structure and minimal functional unit of the electrogenic sodium bicarbonate cotransporter NBCe1-A. 2008

Liyo Kao, and Pakan Sassani, and Rustam Azimov, and Alexander Pushkin, and Natalia Abuladze, and Janos Peti-Peterdi, and Weixin Liu, and Debra Newman, and Ira Kurtz
Division of Nephrology, David Geffen School Medicine, UCLA, Los Angeles, California 90095-1689, USA.

The electrogenic sodium bicarbonate cotransporter NBCe1-A mediates the basolateral absorption of sodium and bicarbonate in the proximal tubule. In this study the oligomeric state and minimal functional unit of NBCe1-A were investigated. Wild-type (wt) NBCe1-A isolated from mouse kidney or heterologously expressed in HEK293 cells was predominantly in a dimeric state as was shown using fluorescence energy transfer, pulldown, immunoprecipitation, cross-linking experiments, and nondenaturing perfluorooctanoate-PAGE. NBCe1-A monomers were found to be covalently linked by S-S bonds. When each of the 15 native cysteine residues were individually removed on a wt-NBCe1-A backbone, dimerization of the cotransporter was not affected. In experiments involving multiple native cysteine residue removal, both Cys(630) and Cys(642) in extracellular loop 3 were shown to mediate S-S bond formation between NBCe1-A monomers. When native NBCe1-A cysteine residues were individually reintroduced into a cysteineless NBCe1-A mutant backbone, the finding that a Cys(992) construct that lacked S-S bonds functioned normally indicated that stable covalent linkage of NBCe1-A monomers was not a necessary requirement for functional activity of the cotransporter. Studies using concatameric constructs of wt-NBCe1-A, whose activity is resistant to methanesulfonate reagents, and an NBCe1-A(T442C) mutant, whose activity is completely inhibited by methanesulfonate reagents, confirmed that NBCe1-A monomers are functional. Our results demonstrate that wt-NBCe1-A is predominantly a homodimer, dependent on S-S bond formation that is composed of functionally active monomers.

UI MeSH Term Description Entries
D011994 Recombinant Proteins Proteins prepared by recombinant DNA technology. Biosynthetic Protein,Biosynthetic Proteins,DNA Recombinant Proteins,Recombinant Protein,Proteins, Biosynthetic,Proteins, Recombinant DNA,DNA Proteins, Recombinant,Protein, Biosynthetic,Protein, Recombinant,Proteins, DNA Recombinant,Proteins, Recombinant,Recombinant DNA Proteins,Recombinant Proteins, DNA
D002460 Cell Line Established cell cultures that have the potential to propagate indefinitely. Cell Lines,Line, Cell,Lines, Cell
D006801 Humans Members of the species Homo sapiens. Homo sapiens,Man (Taxonomy),Human,Man, Modern,Modern Man
D000818 Animals Unicellular or multicellular, heterotrophic organisms, that have sensation and the power of voluntary movement. Under the older five kingdom paradigm, Animalia was one of the kingdoms. Under the modern three domain model, Animalia represents one of the many groups in the domain EUKARYOTA. Animal,Metazoa,Animalia
D017433 Protein Structure, Secondary The level of protein structure in which regular hydrogen-bond interactions within contiguous stretches of polypeptide chain give rise to ALPHA-HELICES; BETA-STRANDS (which align to form BETA-SHEETS), or other types of coils. This is the first folding level of protein conformation. Secondary Protein Structure,Protein Structures, Secondary,Secondary Protein Structures,Structure, Secondary Protein,Structures, Secondary Protein
D019281 Dimerization The process by which two molecules of the same chemical composition form a condensation product or polymer. Dimerizations
D019943 Amino Acid Substitution The naturally occurring or experimentally induced replacement of one or more AMINO ACIDS in a protein with another. If a functionally equivalent amino acid is substituted, the protein may retain wild-type activity. Substitution may also diminish, enhance, or eliminate protein function. Experimentally induced substitution is often used to study enzyme activities and binding site properties. Amino Acid Substitutions,Substitution, Amino Acid,Substitutions, Amino Acid
D020125 Mutation, Missense A mutation in which a codon is mutated to one directing the incorporation of a different amino acid. This substitution may result in an inactive or unstable product. (From A Dictionary of Genetics, King & Stansfield, 5th ed) Missense Mutation,Missense Mutations,Mutations, Missense
D020836 Protein Structure, Quaternary The characteristic 3-dimensional shape and arrangement of multimeric proteins (aggregates of more than one polypeptide chain). Quaternary Protein Structure,Protein Structures, Quaternary,Quaternary Protein Structures
D027982 Sodium-Bicarbonate Symporters Proteins that cotransport sodium ions and bicarbonate ions across cellular membranes. SLC4A5 Protein,Electrogenic Sodium Bicarbonate Cotransporter 1,Electrogenic Sodium Bicarbonate Cotransporter 4,Electroneutral Na(+)-Driven Cl-HCO3 Exchanger,Electroneutral Sodium Bicarbonate Exchanger 1,NBC1 Protein,NBC3 Protein,NBC4 Protein,NBCE1 Protein,NBCe2 Protein,NBCn2 Protein,NCBE Protein,Na-HCO3 Symport,SLC4A10 Protein,SLC4A4 Protein,SLC4A7 Protein,SLC4A8 Protein,Sodium Bicarbonate Cotransporter 2,Sodium Bicarbonate Cotransporter 3,Sodium Bicarbonate Symport,Sodium-Bicarbonate Cotransporter,Sodium-Coupled Bicarbonate Transporters,Sodium-driven chloride bicarbonate exchanger,Solute Carrier Family 4 Member 10,Solute Carrier Family 4 Member 4,Solute Carrier Family 4 Member 5,Solute Carrier Family 4 Member 7,Solute Carrier Family 4 Member 8,Solute Carrier Family 4, Sodium Bicarbonate Cotransporter, Member 10,Solute Carrier Family 4, Sodium Bicarbonate Cotransporter, Member 4,Solute Carrier Family 4, Sodium Bicarbonate Cotransporter, Member 5,Solute Carrier Family 4, Sodium Bicarbonate Cotransporter, Member 7,Solute Carrier Family 4, Sodium Bicarbonate Cotransporter, Member 8,k-NBC3 Protein,Bicarbonate Symport, Sodium,Bicarbonate Transporters, Sodium-Coupled,Cotransporter, Sodium-Bicarbonate,Na HCO3 Symport,Protein, NBC1,Protein, NBC3,Protein, NBC4,Protein, NBCE1,Protein, NBCe2,Protein, NBCn2,Protein, SLC4A10,Protein, SLC4A4,Protein, SLC4A5,Protein, SLC4A7,Protein, SLC4A8,Protein, k-NBC3,Sodium Bicarbonate Cotransporter,Sodium Bicarbonate Symporters,Sodium Coupled Bicarbonate Transporters,Sodium driven chloride bicarbonate exchanger,Symport, Na-HCO3,Symport, Sodium Bicarbonate,Symporters, Sodium-Bicarbonate,Transporters, Sodium-Coupled Bicarbonate,k NBC3 Protein

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