Near-UV circular dichroism reveals structural transitions of vimentin subunits during intermediate filament assembly. 2009

Sofia Georgakopoulou, and Dorothee Möller, and Nadine Sachs, and Harald Herrmann, and Ueli Aebi
M. E. Müller Institute for Structural Biology, University of Basel, Switzerland. sofia.georgakopoulou@unibas.ch

In vitro assembly of vimentin intermediate filaments (IFs) proceeds from soluble, reconstituted tetrameric complexes to mature filaments in three distinct stages: (1) within the first seconds after initiation of assembly, tetramers laterally associate into unit-length filaments (ULFs), on average 17 nm wide; (2) for the next few minutes, ULFs grow by longitudinal annealing into short, immature filaments; (3) almost concomitant with elongation, these immature filaments begin to radially compact, yielding approximately 11-nm-wide IFs at around 15 min. The near-UV CD signal of soluble tetramers exhibits two main peaks at 285 and 278 nm, which do not change during ULF formation. In contrast, the CD signal of mature IFs exhibits two major changes: (1) the 278-nm band, denoting the transition of the tyrosines from the ground state to the first vibrational mode of the excited state, is lost; (2) a red-shifted band appears at 291 nm, indicating the emergence of a new electronic species. These changes take place independently and at different time scales. The 278-nm signal disappears within the first minute of assembly, compatible with increased rigidity of the tyrosines during elongation of the ULFs. The rise of the 291-nm band has a lifetime of approximately 13 min and denotes the generation of phenolates by deprotonation of the tyrosines' hydroxyl group after they relocalize into a negatively charged environment. The appearance of such tyrosine-binding "pockets" in the assembling filaments highlights an essential part of the molecular rearrangements characterizing the later stages of the assembly process, including the radial compaction.

UI MeSH Term Description Entries
D007382 Intermediate Filaments Cytoplasmic filaments intermediate in diameter (about 10 nanometers) between the microfilaments and the microtubules. They may be composed of any of a number of different proteins and form a ring around the cell nucleus. Tonofilaments,Neurofilaments,Filament, Intermediate,Filaments, Intermediate,Intermediate Filament,Neurofilament,Tonofilament
D008958 Models, Molecular Models used experimentally or theoretically to study molecular shape, electronic properties, or interactions; includes analogous molecules, computer-generated graphics, and mechanical structures. Molecular Models,Model, Molecular,Molecular Model
D002942 Circular Dichroism A change from planar to elliptic polarization when an initially plane-polarized light wave traverses an optically active medium. (McGraw-Hill Dictionary of Scientific and Technical Terms, 4th ed) Circular Dichroism, Vibrational,Dichroism, Circular,Vibrational Circular Dichroism
D006801 Humans Members of the species Homo sapiens. Homo sapiens,Man (Taxonomy),Human,Man, Modern,Modern Man
D014746 Vimentin An intermediate filament protein found in most differentiating cells, in cells grown in tissue culture, and in certain fully differentiated cells. Its insolubility suggests that it serves a structural function in the cytoplasm. MW 52,000.
D055503 Protein Multimerization The assembly of the QUATERNARY PROTEIN STRUCTURE of multimeric proteins (MULTIPROTEIN COMPLEXES) from their composite PROTEIN SUBUNITS. Protein Dimerization,Protein Heteromultimerizaton,Protein Multimer Assembly,Protein Trimerization,Assembly, Protein Multimer,Dimerization, Protein,Heteromultimerizaton, Protein,Heteromultimerizatons, Protein,Multimer Assembly, Protein,Multimerization, Protein,Trimerization, Protein
D020836 Protein Structure, Quaternary The characteristic 3-dimensional shape and arrangement of multimeric proteins (aggregates of more than one polypeptide chain). Quaternary Protein Structure,Protein Structures, Quaternary,Quaternary Protein Structures

Related Publications

Sofia Georgakopoulou, and Dorothee Möller, and Nadine Sachs, and Harald Herrmann, and Ueli Aebi
February 1990, Cell,
Sofia Georgakopoulou, and Dorothee Möller, and Nadine Sachs, and Harald Herrmann, and Ueli Aebi
August 2009, Langmuir : the ACS journal of surfaces and colloids,
Sofia Georgakopoulou, and Dorothee Möller, and Nadine Sachs, and Harald Herrmann, and Ueli Aebi
August 2013, The journal of physical chemistry. B,
Sofia Georgakopoulou, and Dorothee Möller, and Nadine Sachs, and Harald Herrmann, and Ueli Aebi
April 2019, JCI insight,
Sofia Georgakopoulou, and Dorothee Möller, and Nadine Sachs, and Harald Herrmann, and Ueli Aebi
June 2022, International journal of molecular sciences,
Sofia Georgakopoulou, and Dorothee Möller, and Nadine Sachs, and Harald Herrmann, and Ueli Aebi
November 2008, Journal of biochemistry,
Sofia Georgakopoulou, and Dorothee Möller, and Nadine Sachs, and Harald Herrmann, and Ueli Aebi
November 1980, Biochemical and biophysical research communications,
Sofia Georgakopoulou, and Dorothee Möller, and Nadine Sachs, and Harald Herrmann, and Ueli Aebi
December 1996, Proteins,
Sofia Georgakopoulou, and Dorothee Möller, and Nadine Sachs, and Harald Herrmann, and Ueli Aebi
August 2010, PloS one,
Sofia Georgakopoulou, and Dorothee Möller, and Nadine Sachs, and Harald Herrmann, and Ueli Aebi
February 2014, Biomacromolecules,
Copied contents to your clipboard!