Identification and characterization of RNA polymerase sigma factor from Micrococcus luteus. 1991

M Nakayama, and N Fujita, and S Osawa, and A Ishihama
Department of Molecular Genetics, National Institute of Genetics, Shizuoka, Japan.

The promoters of Micrococcus luteus, a bacterium whose chromosomal DNA has a high G + C content (74%), diverge from the consensus prokaryotic promoter in having GC-rich DNA sequences at less important positions (Nakayama, M., Fujita, N., Ohama, T., Osawa, S., and Ishihama, A. (1989) Mol. Gen. Genet. 218, 384-389). In order to compare the promoter selectivity of RNA polymerase between M. luteus and Escherichia coli, we purified the enzyme from both organisms. The sets of promoters recognized by the two RNA polymerases were found to overlap partly. Some, but not all, E. coli promoters were found to be correctly transcribed in vitro by M. luteus RNA polymerase as well as the E. coli enzyme. One molecular species of M. luteus sigma factor, with the apparent molecular mass of 60 kDa, was isolated from purified RNA polymerase. By the addition of either M. luteus or E. coli core enzyme it was reconstituted into active holoenzyme. Likewise, M. luteus core enzyme was reconstituted into a hybrid holoenzyme by the addition of E. coli sigma subunit. Both hybrid holoenzymes were, however, able to initiate transcription only from promoters which were recognized by both of the native holoenzymes.

UI MeSH Term Description Entries
D007527 Isoenzymes Structurally related forms of an enzyme. Each isoenzyme has the same mechanism and classification, but differs in its chemical, physical, or immunological characteristics. Alloenzyme,Allozyme,Isoenzyme,Isozyme,Isozymes,Alloenzymes,Allozymes
D008837 Micrococcus A genus of gram-positive, spherical bacteria found in soils and fresh water, and frequently on the skin of man and other animals.
D011401 Promoter Regions, Genetic DNA sequences which are recognized (directly or indirectly) and bound by a DNA-dependent RNA polymerase during the initiation of transcription. Highly conserved sequences within the promoter include the Pribnow box in bacteria and the TATA BOX in eukaryotes. rRNA Promoter,Early Promoters, Genetic,Late Promoters, Genetic,Middle Promoters, Genetic,Promoter Regions,Promoter, Genetic,Promotor Regions,Promotor, Genetic,Pseudopromoter, Genetic,Early Promoter, Genetic,Genetic Late Promoter,Genetic Middle Promoters,Genetic Promoter,Genetic Promoter Region,Genetic Promoter Regions,Genetic Promoters,Genetic Promotor,Genetic Promotors,Genetic Pseudopromoter,Genetic Pseudopromoters,Late Promoter, Genetic,Middle Promoter, Genetic,Promoter Region,Promoter Region, Genetic,Promoter, Genetic Early,Promoter, rRNA,Promoters, Genetic,Promoters, Genetic Middle,Promoters, rRNA,Promotor Region,Promotors, Genetic,Pseudopromoters, Genetic,Region, Genetic Promoter,Region, Promoter,Region, Promotor,Regions, Genetic Promoter,Regions, Promoter,Regions, Promotor,rRNA Promoters
D004591 Electrophoresis, Polyacrylamide Gel Electrophoresis in which a polyacrylamide gel is used as the diffusion medium. Polyacrylamide Gel Electrophoresis,SDS-PAGE,Sodium Dodecyl Sulfate-PAGE,Gel Electrophoresis, Polyacrylamide,SDS PAGE,Sodium Dodecyl Sulfate PAGE,Sodium Dodecyl Sulfate-PAGEs
D004926 Escherichia coli A species of gram-negative, facultatively anaerobic, rod-shaped bacteria (GRAM-NEGATIVE FACULTATIVELY ANAEROBIC RODS) commonly found in the lower part of the intestine of warm-blooded animals. It is usually nonpathogenic, but some strains are known to produce DIARRHEA and pyogenic infections. Pathogenic strains (virotypes) are classified by their specific pathogenic mechanisms such as toxins (ENTEROTOXIGENIC ESCHERICHIA COLI), etc. Alkalescens-Dispar Group,Bacillus coli,Bacterium coli,Bacterium coli commune,Diffusely Adherent Escherichia coli,E coli,EAggEC,Enteroaggregative Escherichia coli,Enterococcus coli,Diffusely Adherent E. coli,Enteroaggregative E. coli,Enteroinvasive E. coli,Enteroinvasive Escherichia coli
D001667 Binding, Competitive The interaction of two or more substrates or ligands with the same binding site. The displacement of one by the other is used in quantitative and selective affinity measurements. Competitive Binding
D012321 DNA-Directed RNA Polymerases Enzymes that catalyze DNA template-directed extension of the 3'-end of an RNA strand one nucleotide at a time. They can initiate a chain de novo. In eukaryotes, three forms of the enzyme have been distinguished on the basis of sensitivity to alpha-amanitin, and the type of RNA synthesized. (From Enzyme Nomenclature, 1992). DNA-Dependent RNA Polymerases,RNA Polymerases,Transcriptases,DNA-Directed RNA Polymerase,RNA Polymerase,Transcriptase,DNA Dependent RNA Polymerases,DNA Directed RNA Polymerase,DNA Directed RNA Polymerases,Polymerase, DNA-Directed RNA,Polymerase, RNA,Polymerases, DNA-Dependent RNA,Polymerases, DNA-Directed RNA,Polymerases, RNA,RNA Polymerase, DNA-Directed,RNA Polymerases, DNA-Dependent,RNA Polymerases, DNA-Directed
D012808 Sigma Factor A protein which is a subunit of RNA polymerase. It effects initiation of specific RNA chains from DNA. Sigma Element,Sigma Initiation Factor,Sigma Subunit,Minor Sigma Factor,RNA Polymerase Sigma Factor H,Factor, Sigma,Factor, Sigma Initiation,Initiation Factor, Sigma,Sigma Factor, Minor,Subunit, Sigma

Related Publications

M Nakayama, and N Fujita, and S Osawa, and A Ishihama
December 1977, Hoppe-Seyler's Zeitschrift fur physiologische Chemie,
M Nakayama, and N Fujita, and S Osawa, and A Ishihama
January 1995, Molecular microbiology,
M Nakayama, and N Fujita, and S Osawa, and A Ishihama
January 1974, Methods in enzymology,
M Nakayama, and N Fujita, and S Osawa, and A Ishihama
June 1984, European journal of biochemistry,
M Nakayama, and N Fujita, and S Osawa, and A Ishihama
December 1980, Proceedings of the National Academy of Sciences of the United States of America,
M Nakayama, and N Fujita, and S Osawa, and A Ishihama
April 1975, European journal of biochemistry,
M Nakayama, and N Fujita, and S Osawa, and A Ishihama
December 1968, The Journal of biological chemistry,
M Nakayama, and N Fujita, and S Osawa, and A Ishihama
August 1971, Biochemical and biophysical research communications,
M Nakayama, and N Fujita, and S Osawa, and A Ishihama
August 1977, The Journal of biological chemistry,
M Nakayama, and N Fujita, and S Osawa, and A Ishihama
September 1969, Nature,
Copied contents to your clipboard!