Unfolding of hydrophobic polymers in guanidinium chloride solutions. 2010

Rahul Godawat, and Sumanth N Jamadagni, and Shekhar Garde
The Howard P. Isermann Department of Chemical & Biological Engineering, and Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, Troy, New York 12180, USA.

Guanidinium chloride (GdmCl) is a widely used chemical denaturant that unfolds proteins. Its effects on hydrophobic interactions are, however, not fully understood. We quantify the effects of GdmCl on various manifestations of hydrophobicity--from solvation and interactions of small solutes to folding-unfolding of hydrophobic polymers--in water and in concentrated GdmCl solutions. For comparison, we also perform similar calculations in solutions of NaCl and CsCl in water. Like NaCl and CsCl, GdmCl increases the surface tension of water, decreases the solubility of small hydrophobic solutes, and enhances the strength of hydrophobic interactions at the pair level. However, unlike NaCl and CsCl, GdmCl destabilizes folded states of hydrophobic polymers. We show that Gdm(+) ions preferentially coat the hydrophobic polymer, and it is the direct van der Waals interaction between Gdm(+) ions and the polymer that contributes to the destabilization of folded states. Interestingly, the temperature dependence of the free energy of unfolding of the hydrophobic polymer in water is protein-like, with signatures of both heat and cold denaturation. Addition of GdmCl shifts the cold denaturation temperature higher, into the experimentally accessible region. Finally, translational as well as conformational dynamics of the polymer are slower in GdmCl and correlate with dynamics of water molecules in solution.

UI MeSH Term Description Entries
D011108 Polymers Compounds formed by the joining of smaller, usually repeating, units linked by covalent bonds. These compounds often form large macromolecules (e.g., BIOPOLYMERS; PLASTICS). Polymer
D012996 Solutions The homogeneous mixtures formed by the mixing of a solid, liquid, or gaseous substance (solute) with a liquid (the solvent), from which the dissolved substances can be recovered by physical processes. (From Grant & Hackh's Chemical Dictionary, 5th ed) Solution
D013696 Temperature The property of objects that determines the direction of heat flow when they are placed in direct thermal contact. The temperature is the energy of microscopic motions (vibrational and translational) of the particles of atoms. Temperatures
D013816 Thermodynamics A rigorously mathematical analysis of energy relationships (heat, work, temperature, and equilibrium). It describes systems whose states are determined by thermal parameters, such as temperature, in addition to mechanical and electromagnetic parameters. (From Hawley's Condensed Chemical Dictionary, 12th ed) Thermodynamic
D014867 Water A clear, odorless, tasteless liquid that is essential for most animal and plant life and is an excellent solvent for many substances. The chemical formula is hydrogen oxide (H2O). (McGraw-Hill Dictionary of Scientific and Technical Terms, 4th ed) Hydrogen Oxide
D057927 Hydrophobic and Hydrophilic Interactions The thermodynamic interaction between a substance and WATER. Hydrophilic Interactions,Hydrophilic and Hydrophobic Interactions,Hydrophilicity,Hydrophobic Interactions,Hydrophobicity,Hydrophilic Interaction,Hydrophilicities,Hydrophobic Interaction,Hydrophobicities,Interaction, Hydrophilic,Interaction, Hydrophobic,Interactions, Hydrophilic,Interactions, Hydrophobic
D019791 Guanidine A strong organic base existing primarily as guanidium ions at physiological pH. It is found in the urine as a normal product of protein metabolism. It is also used in laboratory research as a protein denaturant. (From Martindale, the Extra Pharmacopoeia, 30th ed and Merck Index, 12th ed) It is also used in the treatment of myasthenia and as a fluorescent probe in HPLC. Guanidine Hydrochloride,Guanidinium,Guanidinium Chloride,Guanidine Monohydrate,Guanidine Monohydrobromide,Guanidine Monohydrochloride,Guanidine Monohydroiodine,Guanidine Nitrate,Guanidine Phosphate,Guanidine Sulfate,Guanidine Sulfate (1:1),Guanidine Sulfate (2:1),Guanidine Sulfite (1:1),Guanidium Chloride,Chloride, Guanidinium,Chloride, Guanidium,Hydrochloride, Guanidine,Monohydrate, Guanidine,Monohydrobromide, Guanidine,Monohydrochloride, Guanidine,Monohydroiodine, Guanidine,Nitrate, Guanidine,Phosphate, Guanidine,Sulfate, Guanidine

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