BIOMAT Database Logo BIOMAT Database Logo

Genome sequence of a porcine extraintestinal pathogenic Escherichia coli strain. 2011

Chen Tan, and Zhuofei Xu, and Huajun Zheng, and Wugang Liu, and Xibiao Tang, and Jin Shou, and Bin Wu, and Shengyue Wang, and Guo-Ping Zhao, and Huanchun Chen
State Key Laboratory of Agricultural Microbiology, College of Veterinary Medicine, Huazhong Agricultural University, Wuhan, People’s Republic of China.

Extraintestinal pathogenic Escherichia coli (ExPEC) is an important pathogen which can infect humans and animals and cause many diseases outside the intestine. Here, we report the first draft genome sequence of a porcine ExPEC strain, PCN033, isolated from a pig with meningitis.

UI MeSH Term Description Entries
D008969 Molecular Sequence Data Descriptions of specific amino acid, carbohydrate, or nucleotide sequences which have appeared in the published literature and/or are deposited in and maintained by databanks such as GENBANK, European Molecular Biology Laboratory (EMBL), National Biomedical Research Foundation (NBRF), or other sequence repositories. Sequence Data, Molecular,Molecular Sequencing Data,Data, Molecular Sequence,Data, Molecular Sequencing,Sequencing Data, Molecular
D004269 DNA, Bacterial Deoxyribonucleic acid that makes up the genetic material of bacteria. Bacterial DNA
D004926 Escherichia coli A species of gram-negative, facultatively anaerobic, rod-shaped bacteria (GRAM-NEGATIVE FACULTATIVELY ANAEROBIC RODS) commonly found in the lower part of the intestine of warm-blooded animals. It is usually nonpathogenic, but some strains are known to produce DIARRHEA and pyogenic infections. Pathogenic strains (virotypes) are classified by their specific pathogenic mechanisms such as toxins (ENTEROTOXIGENIC ESCHERICHIA COLI), etc. Alkalescens-Dispar Group,Bacillus coli,Bacterium coli,Bacterium coli commune,Diffusely Adherent Escherichia coli,E coli,EAggEC,Enteroaggregative Escherichia coli,Enterococcus coli,Diffusely Adherent E. coli,Enteroaggregative E. coli,Enteroinvasive E. coli,Enteroinvasive Escherichia coli
D004927 Escherichia coli Infections Infections with bacteria of the species ESCHERICHIA COLI. E coli Infections,E. coli Infection,Infections, E coli,Infections, Escherichia coli,E coli Infection,E. coli Infections,Escherichia coli Infection,Infection, E coli,Infection, E. coli,Infection, Escherichia coli
D000818 Animals Unicellular or multicellular, heterotrophic organisms, that have sensation and the power of voluntary movement. Under the older five kingdom paradigm, Animalia was one of the kingdoms. Under the modern three domain model, Animalia represents one of the many groups in the domain EUKARYOTA. Animal,Metazoa,Animalia
D013552 Swine Any of various animals that constitute the family Suidae and comprise stout-bodied, short-legged omnivorous mammals with thick skin, usually covered with coarse bristles, a rather long mobile snout, and small tail. Included are the genera Babyrousa, Phacochoerus (wart hogs), and Sus, the latter containing the domestic pig (see SUS SCROFA). Phacochoerus,Pigs,Suidae,Warthogs,Wart Hogs,Hog, Wart,Hogs, Wart,Wart Hog
D013553 Swine Diseases Diseases of domestic swine and of the wild boar of the genus Sus. Disease, Swine,Diseases, Swine,Swine Disease
D016680 Genome, Bacterial The genetic complement of a BACTERIA as represented in its DNA. Bacterial Genome,Bacterial Genomes,Genomes, Bacterial
D016920 Meningitis, Bacterial Bacterial infections of the leptomeninges and subarachnoid space, frequently involving the cerebral cortex, cranial nerves, cerebral blood vessels, spinal cord, and nerve roots. Bacterial Meningitis,Bacterial Meningitides,Meningitides, Bacterial
D017422 Sequence Analysis, DNA A multistage process that includes cloning, physical mapping, subcloning, determination of the DNA SEQUENCE, and information analysis. DNA Sequence Analysis,Sequence Determination, DNA,Analysis, DNA Sequence,DNA Sequence Determination,DNA Sequence Determinations,DNA Sequencing,Determination, DNA Sequence,Determinations, DNA Sequence,Sequence Determinations, DNA,Analyses, DNA Sequence,DNA Sequence Analyses,Sequence Analyses, DNA,Sequencing, DNA

Related Publications

Chen Tan, and Zhuofei Xu, and Huajun Zheng, and Wugang Liu, and Xibiao Tang, and Jin Shou, and Bin Wu, and Shengyue Wang, and Guo-Ping Zhao, and Huanchun Chen
Complete Genome Sequence of a Carbapenem-Resistant Extraintestinal Pathogenic Escherichia coli Strain Belonging to the Sequence Type 131 H30R Subclade.
April 2015, Genome announcements,
Chen Tan, and Zhuofei Xu, and Huajun Zheng, and Wugang Liu, and Xibiao Tang, and Jin Shou, and Bin Wu, and Shengyue Wang, and Guo-Ping Zhao, and Huanchun Chen
The genome sequence of avian pathogenic Escherichia coli strain O1:K1:H7 shares strong similarities with human extraintestinal pathogenic E. coli genomes.
April 2007, Journal of bacteriology,
Chen Tan, and Zhuofei Xu, and Huajun Zheng, and Wugang Liu, and Xibiao Tang, and Jin Shou, and Bin Wu, and Shengyue Wang, and Guo-Ping Zhao, and Huanchun Chen
Complete Genome Sequence of the Escherichia coli PMV-1 Strain, a Model Extraintestinal Pathogenic E. coli Strain Used for Host-Pathogen Interaction Studies.
October 2013, Genome announcements,
Chen Tan, and Zhuofei Xu, and Huajun Zheng, and Wugang Liu, and Xibiao Tang, and Jin Shou, and Bin Wu, and Shengyue Wang, and Guo-Ping Zhao, and Huanchun Chen
Genome Sequence of Avian Escherichia coli Strain IHIT25637, an Extraintestinal Pathogenic E. coli Strain of ST131 Encoding Colistin Resistance Determinant MCR-1.
September 2016, Genome announcements,
Chen Tan, and Zhuofei Xu, and Huajun Zheng, and Wugang Liu, and Xibiao Tang, and Jin Shou, and Bin Wu, and Shengyue Wang, and Guo-Ping Zhao, and Huanchun Chen
Extraintestinal pathogenic Escherichia coli.
January 2007, Foodborne pathogens and disease,
Chen Tan, and Zhuofei Xu, and Huajun Zheng, and Wugang Liu, and Xibiao Tang, and Jin Shou, and Bin Wu, and Shengyue Wang, and Guo-Ping Zhao, and Huanchun Chen
Extraintestinal Pathogenic Escherichia coli.
January 2018, Current topics in microbiology and immunology,
Chen Tan, and Zhuofei Xu, and Huajun Zheng, and Wugang Liu, and Xibiao Tang, and Jin Shou, and Bin Wu, and Shengyue Wang, and Guo-Ping Zhao, and Huanchun Chen
Function of Rhs proteins in porcine extraintestinal pathogenic Escherichia coli PCN033.
September 2021, Journal of microbiology (Seoul, Korea),
Chen Tan, and Zhuofei Xu, and Huajun Zheng, and Wugang Liu, and Xibiao Tang, and Jin Shou, and Bin Wu, and Shengyue Wang, and Guo-Ping Zhao, and Huanchun Chen
Complete Genome Sequence of the Avian-Pathogenic Escherichia coli Strain APEC O18.
November 2016, Genome announcements,
Chen Tan, and Zhuofei Xu, and Huajun Zheng, and Wugang Liu, and Xibiao Tang, and Jin Shou, and Bin Wu, and Shengyue Wang, and Guo-Ping Zhao, and Huanchun Chen
Complete Genome Sequence of Avian Pathogenic Escherichia coli Strain APEC O2-211.
September 2018, Microbiology resource announcements,
Chen Tan, and Zhuofei Xu, and Huajun Zheng, and Wugang Liu, and Xibiao Tang, and Jin Shou, and Bin Wu, and Shengyue Wang, and Guo-Ping Zhao, and Huanchun Chen
Complete genome sequence of the avian pathogenic Escherichia coli strain APEC O78.
March 2013, Genome announcements,
Copied contents to your clipboard!