Interaction of nalbuphine hydrochloride with deoxyribonucleic acid measured by fluorescence quenching. 2013

S Sultana, and M S Bin Sayeed, and M U Ahmed, and M S Islam, and A Bahar, and M Z Sultan, and A Hasnat
Department of Clinical Pharmacy and Pharmacology, Faculty of Pharmacy, University of Dhaka, Dhaka, Bangladesh.

The interaction of nalbuphine hydrochloride with calf thymus deoxyribonucleic acid was investigated by absorption and fluorescence titration techniques. Hypochromic effect was observed in the absorption spectra of nalbuphine. The fluorescence quenching of nalbuphine by DNA was found to be static according to Stern-Volmer constant at different temperature (2.257×103 L/mol and 1.678×103 L/mol at 298 K and 308 K respectively; binding constants (K) between calf thymus DNA and nalbuphine were 2.081×103 and 8.26×101 at 298 K and 308 K respectively). The binding numbers (n) were 0.9955 and 0.6762 with the standard deviation of 0.225 at 2 different temperatures which indicates mol ratio of Nalbuphine and DNA remains unchanged at different temperatures (298 K and 308 K). The binding affinity of nalbuphine to DNA was calculated at different temperatures and the stoichiometry of binding was characterized to be about 1 nalbuphine molecule per nucleotide. Calibration for nalbuphine, based on quenching titration data, was linear in the concentration range 6.3×10-6 to 6.4×10-4 mol/L. And these binding forces also indicate the binding site of Nalbuphine to be at the minor groove of DNA.

UI MeSH Term Description Entries
D009266 Nalbuphine A narcotic used as a pain medication. It appears to be an agonist at KAPPA RECEPTORS and an antagonist or partial agonist at MU RECEPTORS. EN-2234A,Nalbuphine Hydrochloride,Nalbuphine Serb,Nubain,EN 2234A,EN2234A
D004247 DNA A deoxyribonucleotide polymer that is the primary genetic material of all cells. Eukaryotic and prokaryotic organisms normally contain DNA in a double-stranded state, yet several important biological processes transiently involve single-stranded regions. DNA, which consists of a polysugar-phosphate backbone possessing projections of purines (adenine and guanine) and pyrimidines (thymine and cytosine), forms a double helix that is held together by hydrogen bonds between these purines and pyrimidines (adenine to thymine and guanine to cytosine). DNA, Double-Stranded,Deoxyribonucleic Acid,ds-DNA,DNA, Double Stranded,Double-Stranded DNA,ds DNA
D006863 Hydrogen-Ion Concentration The normality of a solution with respect to HYDROGEN ions; H+. It is related to acidity measurements in most cases by pH pH,Concentration, Hydrogen-Ion,Concentrations, Hydrogen-Ion,Hydrogen Ion Concentration,Hydrogen-Ion Concentrations
D013050 Spectrometry, Fluorescence Measurement of the intensity and quality of fluorescence. Fluorescence Spectrophotometry,Fluorescence Spectroscopy,Spectrofluorometry,Fluorescence Spectrometry,Spectrophotometry, Fluorescence,Spectroscopy, Fluorescence
D013816 Thermodynamics A rigorously mathematical analysis of energy relationships (heat, work, temperature, and equilibrium). It describes systems whose states are determined by thermal parameters, such as temperature, in addition to mechanical and electromagnetic parameters. (From Hawley's Condensed Chemical Dictionary, 12th ed) Thermodynamic

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