Pseudorabies virus can be classified into five genotypes using partial sequences of UL44. 2012

A A Fonseca, and M F Camargos, and M L Sales, and M B Heinemann, and R C Leite, and J K P Reis
Laboratório Nacional Agropecuário, Ministério da Agricultura, Pecuária e Abastecimento , Pedro Leopoldo, MG , Brasil.

Suid herpesvirus 1 (SuHV-1) is the causative agent of pseudorabies (PR), a disease of great importance due to the huge losses it causes in the swine industry. The aim of this study was to determine a method for genotyping SuHV-1 based on partial sequences of the gene coding for glycoprotein C (gC) and to elucidate the possible reasons for the variability of this region. A total of 109 gCsequences collected from GenBank were divided into five major groups after reconstruction of a phylogenetic tree by Bayesian inference. The analysis showed that a portion of gC (approximately 671 bp) is under selective pressure at various points that coincide with regions of protein disorder. It was also possible to divide SuHV-1 into five genotypes that evolved under different selective pressures. These genotypes are not specific to countries or continents, perhaps due to multiple introduction events related to the importation of swine.

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