[The epidemiological characteristics of group C rotavirus in Lulong area and the analysis of diversity of VP6 gene]. 2013

Rui Peng, and Dan-Di Li, and Kun Cai, and Jia-Jian Qin, and Yong-Xia Wang, and Qiang Lin, and Yan-Qing Guo, and Chun-Yan Zhao, and Zhao-Jun Duan
Jilin University, Changchun, China.

OBJECTIVE To study the epdimiology characteristics and the diversity of VP6 gene of GCRV in Lulong, and to provide the basis for GCRV in-depth research. METHODS 793 stool specimens from porcine with diarrhea or not from Lulong in 2007 and 2008. GCRV was detected by nested multiple reverse transcription- polymerase chain reaction (nested RT-PCR) , and analyzed the identity and conducted phylogenetic tree by the seqences. RESULTS The positive rate of GCRV was 16.65%. Porcine GCRV strains of Lulong had significant homology differences. Phylogenetic analysis indicated porcine GCRVs were with significant diversity. Amino acid analysis showed GCRV strains with the same host shared the nearest kinship. CONCLUSIONS The infection rate of GCRV was high from 2007 to 2008 in Lulong. Homology and phylogenetic analysis showed that VP6 gene diversity was widespread. The experimental data provided basis for molecular characteristics of porcine GCRVs.

UI MeSH Term Description Entries
D010802 Phylogeny The relationships of groups of organisms as reflected by their genetic makeup. Community Phylogenetics,Molecular Phylogenetics,Phylogenetic Analyses,Phylogenetic Analysis,Phylogenetic Clustering,Phylogenetic Comparative Analysis,Phylogenetic Comparative Methods,Phylogenetic Distance,Phylogenetic Generalized Least Squares,Phylogenetic Groups,Phylogenetic Incongruence,Phylogenetic Inference,Phylogenetic Networks,Phylogenetic Reconstruction,Phylogenetic Relatedness,Phylogenetic Relationships,Phylogenetic Signal,Phylogenetic Structure,Phylogenetic Tree,Phylogenetic Trees,Phylogenomics,Analyse, Phylogenetic,Analysis, Phylogenetic,Analysis, Phylogenetic Comparative,Clustering, Phylogenetic,Community Phylogenetic,Comparative Analysis, Phylogenetic,Comparative Method, Phylogenetic,Distance, Phylogenetic,Group, Phylogenetic,Incongruence, Phylogenetic,Inference, Phylogenetic,Method, Phylogenetic Comparative,Molecular Phylogenetic,Network, Phylogenetic,Phylogenetic Analyse,Phylogenetic Clusterings,Phylogenetic Comparative Analyses,Phylogenetic Comparative Method,Phylogenetic Distances,Phylogenetic Group,Phylogenetic Incongruences,Phylogenetic Inferences,Phylogenetic Network,Phylogenetic Reconstructions,Phylogenetic Relatednesses,Phylogenetic Relationship,Phylogenetic Signals,Phylogenetic Structures,Phylogenetic, Community,Phylogenetic, Molecular,Phylogenies,Phylogenomic,Reconstruction, Phylogenetic,Relatedness, Phylogenetic,Relationship, Phylogenetic,Signal, Phylogenetic,Structure, Phylogenetic,Tree, Phylogenetic
D002681 China A country spanning from central Asia to the Pacific Ocean. Inner Mongolia,Manchuria,People's Republic of China,Sinkiang,Mainland China
D006801 Humans Members of the species Homo sapiens. Homo sapiens,Man (Taxonomy),Human,Man, Modern,Modern Man
D000818 Animals Unicellular or multicellular, heterotrophic organisms, that have sensation and the power of voluntary movement. Under the older five kingdom paradigm, Animalia was one of the kingdoms. Under the modern three domain model, Animalia represents one of the many groups in the domain EUKARYOTA. Animal,Metazoa,Animalia
D000956 Antigens, Viral Substances elaborated by viruses that have antigenic activity. Viral Antigen,Viral Antigens,Antigen, Viral
D012401 Rotavirus A genus of REOVIRIDAE, causing acute gastroenteritis in BIRDS and MAMMALS, including humans. Transmission is horizontal and by environmental contamination. Seven species (Rotaviruses A thru G) are recognized. Neonatal Calf Diarrhea Virus,Rotaviruses
D013552 Swine Any of various animals that constitute the family Suidae and comprise stout-bodied, short-legged omnivorous mammals with thick skin, usually covered with coarse bristles, a rather long mobile snout, and small tail. Included are the genera Babyrousa, Phacochoerus (wart hogs), and Sus, the latter containing the domestic pig (see SUS SCROFA). Phacochoerus,Pigs,Suidae,Warthogs,Wart Hogs,Hog, Wart,Hogs, Wart,Wart Hog
D014644 Genetic Variation Genotypic differences observed among individuals in a population. Genetic Diversity,Variation, Genetic,Diversity, Genetic,Diversities, Genetic,Genetic Diversities,Genetic Variations,Variations, Genetic
D036022 Capsid Proteins Proteins that form the CAPSID of VIRUSES. Procapsid Protein,Procapsid Proteins,Viral Coat Protein,Viral Coat Proteins,Viral V Antigens,Viral V Proteins,Capsid Protein,Viral Outer Coat Protein,Antigens, Viral V,Coat Protein, Viral,V Antigens, Viral,V Proteins, Viral

Related Publications

Rui Peng, and Dan-Di Li, and Kun Cai, and Jia-Jian Qin, and Yong-Xia Wang, and Qiang Lin, and Yan-Qing Guo, and Chun-Yan Zhao, and Zhao-Jun Duan
March 2010, Genetics and molecular research : GMR,
Rui Peng, and Dan-Di Li, and Kun Cai, and Jia-Jian Qin, and Yong-Xia Wang, and Qiang Lin, and Yan-Qing Guo, and Chun-Yan Zhao, and Zhao-Jun Duan
February 2015, Virus genes,
Rui Peng, and Dan-Di Li, and Kun Cai, and Jia-Jian Qin, and Yong-Xia Wang, and Qiang Lin, and Yan-Qing Guo, and Chun-Yan Zhao, and Zhao-Jun Duan
February 2010, Zhonghua shi yan he lin chuang bing du xue za zhi = Zhonghua shiyan he linchuang bingduxue zazhi = Chinese journal of experimental and clinical virology,
Rui Peng, and Dan-Di Li, and Kun Cai, and Jia-Jian Qin, and Yong-Xia Wang, and Qiang Lin, and Yan-Qing Guo, and Chun-Yan Zhao, and Zhao-Jun Duan
October 1990, Kansenshogaku zasshi. The Journal of the Japanese Association for Infectious Diseases,
Rui Peng, and Dan-Di Li, and Kun Cai, and Jia-Jian Qin, and Yong-Xia Wang, and Qiang Lin, and Yan-Qing Guo, and Chun-Yan Zhao, and Zhao-Jun Duan
January 2009, Journal of medical virology,
Rui Peng, and Dan-Di Li, and Kun Cai, and Jia-Jian Qin, and Yong-Xia Wang, and Qiang Lin, and Yan-Qing Guo, and Chun-Yan Zhao, and Zhao-Jun Duan
January 2021, Voprosy virusologii,
Rui Peng, and Dan-Di Li, and Kun Cai, and Jia-Jian Qin, and Yong-Xia Wang, and Qiang Lin, and Yan-Qing Guo, and Chun-Yan Zhao, and Zhao-Jun Duan
December 2017, The veterinary quarterly,
Rui Peng, and Dan-Di Li, and Kun Cai, and Jia-Jian Qin, and Yong-Xia Wang, and Qiang Lin, and Yan-Qing Guo, and Chun-Yan Zhao, and Zhao-Jun Duan
July 2015, Archives of virology,
Rui Peng, and Dan-Di Li, and Kun Cai, and Jia-Jian Qin, and Yong-Xia Wang, and Qiang Lin, and Yan-Qing Guo, and Chun-Yan Zhao, and Zhao-Jun Duan
November 2012, Journal of virological methods,
Rui Peng, and Dan-Di Li, and Kun Cai, and Jia-Jian Qin, and Yong-Xia Wang, and Qiang Lin, and Yan-Qing Guo, and Chun-Yan Zhao, and Zhao-Jun Duan
August 2014, Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases,
Copied contents to your clipboard!