Monitoring newly synthesized proteins over the adult life span of Caenorhabditis elegans. 2015

Krishna Vukoti, and Xiaokun Yu, and Quanhu Sheng, and Sudipto Saha, and Zhaoyang Feng, and Ao-Lin Hsu, and Masaru Miyagi
Center for Proteomics and Bioinformatics, ‡Department of Pharmacology, and §Department of Ophthalmology and Visual Sciences, Case Western Reserve University , Cleveland, Ohio, United States.

Little is known regarding how the synthesis and degradation of individual proteins change during the life of an organism. Such knowledge is vital to understanding the aging process. To fill this knowledge gap, we monitored newly synthesized proteins on a proteome scale in Caenorhabditis elegans over time during adulthood using a stable-isotope labeling by amino acids in cell culture (SILAC)-based label-chase approach. For most proteins, the rate of appearance of newly synthesized protein was high during the first 5 days of adulthood, slowed down between the fifth and the 11th days, and then increased again after the 11th day. However, the magnitude of appearance rate differed significantly from protein to protein. For example, the appearance of newly synthesized protein was fast for proteins involved in embryonic development, transcription regulation, and lipid binding/transport, with >70% of these proteins newly synthesized by day 5 of adulthood, whereas it was slow for proteins involved in cellular assembly and motility, such as actin and myosin, with <70% of these proteins newly synthesized even on day 16. The late-life increase of newly synthesized protein was especially high for ribosomal proteins and ATP synthases. We also investigated the effect of RNAi-mediated knockdown of the rpl-9 (ribosomal protein), atp-3 (ATP synthase), and ril-1 (RNAi-induced longevity-1) genes and found that inhibiting the expression of atp-3 and ril-1 beginning in late adulthood is still effective to extend the life span of C. elegans.

UI MeSH Term Description Entries
D008136 Longevity The normal length of time of an organism's life. Length of Life,Life Span,Lifespan,Life Spans,Lifespans
D000818 Animals Unicellular or multicellular, heterotrophic organisms, that have sensation and the power of voluntary movement. Under the older five kingdom paradigm, Animalia was one of the kingdoms. Under the modern three domain model, Animalia represents one of the many groups in the domain EUKARYOTA. Animal,Metazoa,Animalia
D017173 Caenorhabditis elegans A species of nematode that is widely used in biological, biochemical, and genetic studies. Caenorhabditis elegan,elegan, Caenorhabditis
D029742 Caenorhabditis elegans Proteins Proteins from the nematode species CAENORHABDITIS ELEGANS. The proteins from this species are the subject of scientific interest in the area of multicellular organism MORPHOGENESIS. C elegans Proteins

Related Publications

Krishna Vukoti, and Xiaokun Yu, and Quanhu Sheng, and Sudipto Saha, and Zhaoyang Feng, and Ao-Lin Hsu, and Masaru Miyagi
January 2014, Age (Dordrecht, Netherlands),
Krishna Vukoti, and Xiaokun Yu, and Quanhu Sheng, and Sudipto Saha, and Zhaoyang Feng, and Ao-Lin Hsu, and Masaru Miyagi
November 1982, Proceedings of the National Academy of Sciences of the United States of America,
Krishna Vukoti, and Xiaokun Yu, and Quanhu Sheng, and Sudipto Saha, and Zhaoyang Feng, and Ao-Lin Hsu, and Masaru Miyagi
January 1999, Neurobiology of aging,
Krishna Vukoti, and Xiaokun Yu, and Quanhu Sheng, and Sudipto Saha, and Zhaoyang Feng, and Ao-Lin Hsu, and Masaru Miyagi
September 1988, Journal of gerontology,
Krishna Vukoti, and Xiaokun Yu, and Quanhu Sheng, and Sudipto Saha, and Zhaoyang Feng, and Ao-Lin Hsu, and Masaru Miyagi
May 2009, Journal of visualized experiments : JoVE,
Krishna Vukoti, and Xiaokun Yu, and Quanhu Sheng, and Sudipto Saha, and Zhaoyang Feng, and Ao-Lin Hsu, and Masaru Miyagi
May 2000, The journals of gerontology. Series A, Biological sciences and medical sciences,
Krishna Vukoti, and Xiaokun Yu, and Quanhu Sheng, and Sudipto Saha, and Zhaoyang Feng, and Ao-Lin Hsu, and Masaru Miyagi
May 2012, The journals of gerontology. Series A, Biological sciences and medical sciences,
Krishna Vukoti, and Xiaokun Yu, and Quanhu Sheng, and Sudipto Saha, and Zhaoyang Feng, and Ao-Lin Hsu, and Masaru Miyagi
May 2004, The journals of gerontology. Series A, Biological sciences and medical sciences,
Krishna Vukoti, and Xiaokun Yu, and Quanhu Sheng, and Sudipto Saha, and Zhaoyang Feng, and Ao-Lin Hsu, and Masaru Miyagi
May 1979, Developmental biology,
Krishna Vukoti, and Xiaokun Yu, and Quanhu Sheng, and Sudipto Saha, and Zhaoyang Feng, and Ao-Lin Hsu, and Masaru Miyagi
August 2023, Proceedings of the National Academy of Sciences of the United States of America,
Copied contents to your clipboard!