Investigating the cellular distribution and interactions of HIV-1 nucleocapsid protein by quantitative fluorescence microscopy. 2015

Halina Anton, and Nedal Taha, and Emmanuel Boutant, and Ludovic Richert, and Heena Khatter, and Bruno Klaholz, and Philippe Rondé, and Eléonore Réal, and Hugues de Rocquigny, and Yves Mély
Laboratoire de Biophotonique et Pharmacologie, UMR 7213 CNRS, Université de Strasbourg, Faculté de Pharmacie, Illkirch, France.

The nucleocapsid protein (NCp7) of the Human immunodeficiency virus type 1 (HIV-1) is a small basic protein containing two zinc fingers. About 2000 NCp7 molecules coat the genomic RNA in the HIV-1 virion. After infection of a target cell, the viral core enters into the cytoplasm, where NCp7 chaperones the reverse transcription of the genomic RNA into the proviral DNA. As a consequence of their much lower affinity for double-stranded DNA as compared to single-stranded RNAs, NCp7 molecules are thought to be released in the cytoplasm and the nucleus of infected cells in the late steps of reverse transcription. Yet, little is known on the cellular distribution of the released NCp7 molecules and on their possible interactions with cell components. Hence, the aim of this study was to identify potential cellular partners of NCp7 and to monitor its intracellular distribution and dynamics by means of confocal fluorescence microscopy, fluorescence lifetime imaging microscopy, fluorescence recovery after photobleaching, fluorescence correlation and cross-correlation spectroscopy, and raster imaging correlation spectroscopy. HeLa cells transfected with eGFP-labeled NCp7 were used as a model system. We found that NCp7-eGFP localizes mainly in the cytoplasm and the nucleoli, where it binds to cellular RNAs, and notably to ribosomal RNAs which are the most abundant. The binding of NCp7 to ribosomes was further substantiated by the intracellular co-diffusion of NCp7 with the ribosomal protein 26, a component of the large ribosomal subunit. Finally, gradient centrifugation experiments demonstrate a direct association of NCp7 with purified 80S ribosomes. Thus, our data suggest that NCp7 molecules released in newly infected cells may primarily bind to ribosomes, where they may exert a new potential role in HIV-1 infection.

UI MeSH Term Description Entries
D008856 Microscopy, Fluorescence Microscopy of specimens stained with fluorescent dye (usually fluorescein isothiocyanate) or of naturally fluorescent materials, which emit light when exposed to ultraviolet or blue light. Immunofluorescence microscopy utilizes antibodies that are labeled with fluorescent dye. Fluorescence Microscopy,Immunofluorescence Microscopy,Microscopy, Immunofluorescence,Fluorescence Microscopies,Immunofluorescence Microscopies,Microscopies, Fluorescence,Microscopies, Immunofluorescence
D011485 Protein Binding The process in which substances, either endogenous or exogenous, bind to proteins, peptides, enzymes, protein precursors, or allied compounds. Specific protein-binding measures are often used as assays in diagnostic assessments. Plasma Protein Binding Capacity,Binding, Protein
D011993 Recombinant Fusion Proteins Recombinant proteins produced by the GENETIC TRANSLATION of fused genes formed by the combination of NUCLEIC ACID REGULATORY SEQUENCES of one or more genes with the protein coding sequences of one or more genes. Fusion Proteins, Recombinant,Recombinant Chimeric Protein,Recombinant Fusion Protein,Recombinant Hybrid Protein,Chimeric Proteins, Recombinant,Hybrid Proteins, Recombinant,Recombinant Chimeric Proteins,Recombinant Hybrid Proteins,Chimeric Protein, Recombinant,Fusion Protein, Recombinant,Hybrid Protein, Recombinant,Protein, Recombinant Chimeric,Protein, Recombinant Fusion,Protein, Recombinant Hybrid,Proteins, Recombinant Chimeric,Proteins, Recombinant Fusion,Proteins, Recombinant Hybrid
D002352 Carrier Proteins Proteins that bind or transport specific substances in the blood, within the cell, or across cell membranes. Binding Proteins,Carrier Protein,Transport Protein,Transport Proteins,Binding Protein,Protein, Carrier,Proteins, Carrier
D002460 Cell Line Established cell cultures that have the potential to propagate indefinitely. Cell Lines,Line, Cell,Lines, Cell
D006801 Humans Members of the species Homo sapiens. Homo sapiens,Man (Taxonomy),Human,Man, Modern,Modern Man
D015497 HIV-1 The type species of LENTIVIRUS and the etiologic agent of AIDS. It is characterized by its cytopathic effect and affinity for the T4-lymphocyte. Human immunodeficiency virus 1,HIV-I,Human Immunodeficiency Virus Type 1,Immunodeficiency Virus Type 1, Human
D015658 HIV Infections Includes the spectrum of human immunodeficiency virus infections that range from asymptomatic seropositivity, thru AIDS-related complex (ARC), to acquired immunodeficiency syndrome (AIDS). HTLV-III Infections,HTLV-III-LAV Infections,T-Lymphotropic Virus Type III Infections, Human,HIV Coinfection,Coinfection, HIV,Coinfections, HIV,HIV Coinfections,HIV Infection,HTLV III Infections,HTLV III LAV Infections,HTLV-III Infection,HTLV-III-LAV Infection,Infection, HIV,Infection, HTLV-III,Infection, HTLV-III-LAV,Infections, HIV,Infections, HTLV-III,Infections, HTLV-III-LAV,T Lymphotropic Virus Type III Infections, Human
D015870 Gene Expression The phenotypic manifestation of a gene or genes by the processes of GENETIC TRANSCRIPTION and GENETIC TRANSLATION. Expression, Gene,Expressions, Gene,Gene Expressions
D042541 Intracellular Space The area within CELLS. Subcellular Space,Intracellular Spaces,Space, Intracellular,Space, Subcellular,Spaces, Intracellular,Spaces, Subcellular,Subcellular Spaces

Related Publications

Halina Anton, and Nedal Taha, and Emmanuel Boutant, and Ludovic Richert, and Heena Khatter, and Bruno Klaholz, and Philippe Rondé, and Eléonore Réal, and Hugues de Rocquigny, and Yves Mély
November 2014, Virus research,
Halina Anton, and Nedal Taha, and Emmanuel Boutant, and Ludovic Richert, and Heena Khatter, and Bruno Klaholz, and Philippe Rondé, and Eléonore Réal, and Hugues de Rocquigny, and Yves Mély
February 2009, Nucleic acids research,
Halina Anton, and Nedal Taha, and Emmanuel Boutant, and Ludovic Richert, and Heena Khatter, and Bruno Klaholz, and Philippe Rondé, and Eléonore Réal, and Hugues de Rocquigny, and Yves Mély
January 2006, Nucleic acids research,
Halina Anton, and Nedal Taha, and Emmanuel Boutant, and Ludovic Richert, and Heena Khatter, and Bruno Klaholz, and Philippe Rondé, and Eléonore Réal, and Hugues de Rocquigny, and Yves Mély
December 2005, Comptes rendus biologies,
Halina Anton, and Nedal Taha, and Emmanuel Boutant, and Ludovic Richert, and Heena Khatter, and Bruno Klaholz, and Philippe Rondé, and Eléonore Réal, and Hugues de Rocquigny, and Yves Mély
May 2005, Journal of molecular biology,
Halina Anton, and Nedal Taha, and Emmanuel Boutant, and Ludovic Richert, and Heena Khatter, and Bruno Klaholz, and Philippe Rondé, and Eléonore Réal, and Hugues de Rocquigny, and Yves Mély
August 2011, Nature protocols,
Halina Anton, and Nedal Taha, and Emmanuel Boutant, and Ludovic Richert, and Heena Khatter, and Bruno Klaholz, and Philippe Rondé, and Eléonore Réal, and Hugues de Rocquigny, and Yves Mély
December 1999, Biochemistry,
Halina Anton, and Nedal Taha, and Emmanuel Boutant, and Ludovic Richert, and Heena Khatter, and Bruno Klaholz, and Philippe Rondé, and Eléonore Réal, and Hugues de Rocquigny, and Yves Mély
April 1996, Biochemistry,
Halina Anton, and Nedal Taha, and Emmanuel Boutant, and Ludovic Richert, and Heena Khatter, and Bruno Klaholz, and Philippe Rondé, and Eléonore Réal, and Hugues de Rocquigny, and Yves Mély
August 2003, Nucleic acids research,
Halina Anton, and Nedal Taha, and Emmanuel Boutant, and Ludovic Richert, and Heena Khatter, and Bruno Klaholz, and Philippe Rondé, and Eléonore Réal, and Hugues de Rocquigny, and Yves Mély
December 2006, Journal of molecular biology,
Copied contents to your clipboard!