Structural comparison of the prokaryotic ribosomal proteins L7/L12 and L30. 1988

M Leijonmarck, and K Appelt, and J Badger, and A Liljas, and K S Wilson, and S W White
Department of Molecular Biology, Biomedicum, Uppsala, Sweden.

The structures of two prokaryotic ribosomal proteins, the carboxyterminal half of L7/L12 from Escherichia coli (L12CTF) and L30 from Bacilus stearothermophilus display a remarkably similar fold in which alpha-helices pack onto one side of an antiparallel, three-stranded, beta-pleated sheet. A detailed comparison of the structures by least-squares methods reveals that more than two-thirds of the alpha carbons can be superimposed with a root mean square distance of 2.33 A. The principal difference is an extra alpha-helix in L12CTF. The sequences of the proteins display a distinct conservation in regions which are crucial to the common fold, in particular the hydrophobic core. It is proposed that the similarity is a result of divergent evolution.

UI MeSH Term Description Entries
D008958 Models, Molecular Models used experimentally or theoretically to study molecular shape, electronic properties, or interactions; includes analogous molecules, computer-generated graphics, and mechanical structures. Molecular Models,Model, Molecular,Molecular Model
D008969 Molecular Sequence Data Descriptions of specific amino acid, carbohydrate, or nucleotide sequences which have appeared in the published literature and/or are deposited in and maintained by databanks such as GENBANK, European Molecular Biology Laboratory (EMBL), National Biomedical Research Foundation (NBRF), or other sequence repositories. Sequence Data, Molecular,Molecular Sequencing Data,Data, Molecular Sequence,Data, Molecular Sequencing,Sequencing Data, Molecular
D011487 Protein Conformation The characteristic 3-dimensional shape of a protein, including the secondary, supersecondary (motifs), tertiary (domains) and quaternary structure of the peptide chain. PROTEIN STRUCTURE, QUATERNARY describes the conformation assumed by multimeric proteins (aggregates of more than one polypeptide chain). Conformation, Protein,Conformations, Protein,Protein Conformations
D004926 Escherichia coli A species of gram-negative, facultatively anaerobic, rod-shaped bacteria (GRAM-NEGATIVE FACULTATIVELY ANAEROBIC RODS) commonly found in the lower part of the intestine of warm-blooded animals. It is usually nonpathogenic, but some strains are known to produce DIARRHEA and pyogenic infections. Pathogenic strains (virotypes) are classified by their specific pathogenic mechanisms such as toxins (ENTEROTOXIGENIC ESCHERICHIA COLI), etc. Alkalescens-Dispar Group,Bacillus coli,Bacterium coli,Bacterium coli commune,Diffusely Adherent Escherichia coli,E coli,EAggEC,Enteroaggregative Escherichia coli,Enterococcus coli,Diffusely Adherent E. coli,Enteroaggregative E. coli,Enteroinvasive E. coli,Enteroinvasive Escherichia coli
D005075 Biological Evolution The process of cumulative change over successive generations through which organisms acquire their distinguishing morphological and physiological characteristics. Evolution, Biological
D000595 Amino Acid Sequence The order of amino acids as they occur in a polypeptide chain. This is referred to as the primary structure of proteins. It is of fundamental importance in determining PROTEIN CONFORMATION. Protein Structure, Primary,Amino Acid Sequences,Sequence, Amino Acid,Sequences, Amino Acid,Primary Protein Structure,Primary Protein Structures,Protein Structures, Primary,Structure, Primary Protein,Structures, Primary Protein
D001411 Geobacillus stearothermophilus A species of GRAM-POSITIVE ENDOSPORE-FORMING BACTERIA in the family BACILLACEAE, found in soil, hot springs, Arctic waters, ocean sediments, and spoiled food products. Bacillus stearothermophilus,Bacillus thermoliquefaciens
D012269 Ribosomal Proteins Proteins found in ribosomes. They are believed to have a catalytic function in reconstituting biologically active ribosomal subunits. Proteins, Ribosomal,Ribosomal Protein,Protein, Ribosomal

Related Publications

M Leijonmarck, and K Appelt, and J Badger, and A Liljas, and K S Wilson, and S W White
May 1974, European journal of biochemistry,
M Leijonmarck, and K Appelt, and J Badger, and A Liljas, and K S Wilson, and S W White
May 1997, FEBS letters,
M Leijonmarck, and K Appelt, and J Badger, and A Liljas, and K S Wilson, and S W White
March 1975, Analytical biochemistry,
M Leijonmarck, and K Appelt, and J Badger, and A Liljas, and K S Wilson, and S W White
January 1982, Biochemical and biophysical research communications,
M Leijonmarck, and K Appelt, and J Badger, and A Liljas, and K S Wilson, and S W White
January 1974, Proceedings of the National Academy of Sciences of the United States of America,
M Leijonmarck, and K Appelt, and J Badger, and A Liljas, and K S Wilson, and S W White
December 1984, Molecular biology reports,
M Leijonmarck, and K Appelt, and J Badger, and A Liljas, and K S Wilson, and S W White
November 1974, FEBS letters,
M Leijonmarck, and K Appelt, and J Badger, and A Liljas, and K S Wilson, and S W White
October 1976, European journal of biochemistry,
M Leijonmarck, and K Appelt, and J Badger, and A Liljas, and K S Wilson, and S W White
December 1974, Proceedings of the National Academy of Sciences of the United States of America,
M Leijonmarck, and K Appelt, and J Badger, and A Liljas, and K S Wilson, and S W White
January 2020, Frontiers in veterinary science,
Copied contents to your clipboard!