Identifying Suicidal Adolescents from Mental Health Records Using Natural Language Processing. 2019

Sumithra Velupillai, and Sophie Epstein, and André Bittar, and Thomas Stephenson, and Rina Dutta, and Johnny Downs
Institute of Psychiatry, Psychology and Neuroscience, King's College London, London, UK.

Suicidal ideation is a risk factor for self-harm, completed suicide and can be indicative of mental health issues. Adolescents are a particularly vulnerable group, but few studies have examined suicidal behaviour prevalence in large cohorts. Electronic Health Records (EHRs) are a rich source of secondary health care data that could be used to estimate prevalence. Most EHR documentation related to suicide risk is written in free text, thus requiring Natural Language Processing (NLP) approaches. We adapted and evaluated a simple lexicon- and rule-based NLP approach to identify suicidal adolescents from a large EHR database. We developed a comprehensive manually annotated EHR reference standard and assessed NLP performance at both document and patient level on data from 200 patients ( 5000 documents). We achieved promising results (>80% f1 score at both document and patient level). Simple NLP approaches can be successfully used to identify patients who exhibit suicidal risk behaviour, and our proposed approach could be useful for other populations and settings.

UI MeSH Term Description Entries
D008603 Mental Health Emotional, psychological, and social well-being of an individual or group. Mental Hygiene,Health, Mental,Hygiene, Mental
D009323 Natural Language Processing Computer processing of a language with rules that reflect and describe current usage rather than prescribed usage. Language Processing, Natural,Language Processings, Natural,Natural Language Processings,Processing, Natural Language,Processings, Natural Language
D006801 Humans Members of the species Homo sapiens. Homo sapiens,Man (Taxonomy),Human,Man, Modern,Modern Man
D000293 Adolescent A person 13 to 18 years of age. Adolescence,Youth,Adolescents,Adolescents, Female,Adolescents, Male,Teenagers,Teens,Adolescent, Female,Adolescent, Male,Female Adolescent,Female Adolescents,Male Adolescent,Male Adolescents,Teen,Teenager,Youths
D013405 Suicide The act of killing oneself. Suicides
D057286 Electronic Health Records Media that facilitate transportability of pertinent information concerning patient's illness across varied providers and geographic locations. Some versions include direct linkages to online CONSUMER HEALTH INFORMATION that is relevant to the health conditions and treatments related to a specific patient. Electronic Health Record Data,Electronic Medical Record,Electronic Medical Records,Computerized Medical Record,Computerized Medical Records,Electronic Health Record,Medical Record, Computerized,Medical Records, Computerized,Health Record, Electronic,Health Records, Electronic,Medical Record, Electronic,Medical Records, Electronic
D059020 Suicidal Ideation A risk factor for suicide attempts and completions, it is the most common of all suicidal behavior, but only a minority of ideators engage in overt self-harm. Ideation, Suicidal,Ideations, Suicidal,Suicidal Ideations

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