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Facilitating Growth through Frustration: Using Genomics Research in a Course-Based Undergraduate Research Experience. 2020
David Lopatto, and
Anne G Rosenwald, and
Justin R DiAngelo, and
Amy T Hark, and
Matthew Skerritt, and
Matthew Wawersik, and
Anna K Allen, and
Consuelo Alvarez, and
Sara Anderson, and
Cindy Arrigo, and
Andrew Arsham, and
Daron Barnard, and
Christopher Bazinet, and
James E J Bedard, and
Indrani Bose, and
John M Braverman, and
Martin G Burg, and
Rebecca C Burgess, and
Paula Croonquist, and
Chunguang Du, and
Sondra Dubowsky, and
Heather Eisler, and
Matthew A Escobar, and
Michael Foulk, and
Emily Furbee, and
Thomas Giarla, and
Rivka L Glaser, and
Anya L Goodman, and
Yuying Gosser, and
Adam Haberman, and
Charles Hauser, and
Shan Hays, and
Carina E Howell, and
Jennifer Jemc, and
M Logan Johnson, and
Christopher J Jones, and
Lisa Kadlec, and
Jacob D Kagey, and
Kimberly L Keller, and
Jennifer Kennell, and
S Catherine Silver Key, and
Adam J Kleinschmit, and
Melissa Kleinschmit, and
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Meg M Laakso, and
Judith Leatherman, and
Lindsey J Long, and
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Juan C Martinez-Cruzado, and
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Amie Jo McClellan, and
Gerard McNeil, and
Evan Merkhofer, and
Vida Mingo, and
Hemlata Mistry, and
Elizabeth Mitchell, and
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Debaditya Mukhopadhyay, and
Jennifer Leigh Myka, and
Alexis Nagengast, and
Paul Overvoorde, and
Don Paetkau, and
Leocadia Paliulis, and
Susan Parrish, and
Mary Lai Preuss, and
James V Price, and
Nicholas A Pullen, and
Catherine Reinke, and
Dennis Revie, and
Srebrenka Robic, and
Jennifer A Roecklein-Canfield, and
Michael R Rubin, and
Takrima Sadikot, and
Jamie Siders Sanford, and
Maria Santisteban, and
Kenneth Saville, and
Stephanie Schroeder, and
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Karim A Sharif, and
Diane E Sklensky, and
Chiyedza Small, and
Mary Smith, and
Sheryl Smith, and
Rebecca Spokony, and
Aparna Sreenivasan, and
Joyce Stamm, and
Rachel Sterne-Marr, and
Katherine C Teeter, and
Justin Thackeray, and
Jeffrey S Thompson, and
Stephanie Toering Peters, and
Melanie Van Stry, and
Norma Velazquez-Ulloa, and
Cindy Wolfe, and
James Youngblom, and
Brian Yowler, and
Leming Zhou, and
Janie Brennan, and
Jeremy Buhler, and
Wilson Leung, and
Laura K Reed, and
Sarah C R Elgin
Center for Teaching, Learning and Assessment, Grinnell College, Grinnell, IA 50112, USA.
A hallmark of the research experience is encountering difficulty and working through those challenges to achieve success. This ability is essential to being a successful scientist, but replicating such challenges in a teaching setting can be difficult. The Genomics Education Partnership (GEP) is a consortium of faculty who engage their students in a genomics Course-Based Undergraduate Research Experience (CURE). Students participate in genome annotation, generating gene models using multiple lines of experimental evidence. Our observations suggested that the students' learning experience is continuous and recursive, frequently beginning with frustration but eventually leading to success as they come up with defendable gene models. In order to explore our "formative frustration" hypothesis, we gathered data from faculty via a survey, and from students via both a general survey and a set of student focus groups. Upon analyzing these data, we found that all three datasets mentioned frustration and struggle, as well as learning and better understanding of the scientific process. Bioinformatics projects are particularly well suited to the process of iteration and refinement because iterations can be performed quickly and are inexpensive in both time and money. Based on these findings, we suggest that a dynamic of "formative frustration" is an important aspect for a successful CURE.
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Adam J Kleinschmit, and
Melissa Kleinschmit, and
Nighat P Kokan, and
Olga Ruiz Kopp, and
Meg M Laakso, and
Judith Leatherman, and
Lindsey J Long, and
Mollie Manier, and
Juan C Martinez-Cruzado, and
Luis F Matos, and
Amie Jo McClellan, and
Gerard McNeil, and
Evan Merkhofer, and
Vida Mingo, and
Hemlata Mistry, and
Elizabeth Mitchell, and
Nathan T Mortimer, and
Debaditya Mukhopadhyay, and
Jennifer Leigh Myka, and
Alexis Nagengast, and
Paul Overvoorde, and
Don Paetkau, and
Leocadia Paliulis, and
Susan Parrish, and
Mary Lai Preuss, and
James V Price, and
Nicholas A Pullen, and
Catherine Reinke, and
Dennis Revie, and
Srebrenka Robic, and
Jennifer A Roecklein-Canfield, and
Michael R Rubin, and
Takrima Sadikot, and
Jamie Siders Sanford, and
Maria Santisteban, and
Kenneth Saville, and
Stephanie Schroeder, and
Christopher D Shaffer, and
Karim A Sharif, and
Diane E Sklensky, and
Chiyedza Small, and
Mary Smith, and
Sheryl Smith, and
Rebecca Spokony, and
Aparna Sreenivasan, and
Joyce Stamm, and
Rachel Sterne-Marr, and
Katherine C Teeter, and
Justin Thackeray, and
Jeffrey S Thompson, and
Stephanie Toering Peters, and
Melanie Van Stry, and
Norma Velazquez-Ulloa, and
Cindy Wolfe, and
James Youngblom, and
Brian Yowler, and
Leming Zhou, and
Janie Brennan, and
Jeremy Buhler, and
Wilson Leung, and
Laura K Reed, and
Sarah C R Elgin
January 2020,
Journal of microbiology & biology education,
David Lopatto, and
Anne G Rosenwald, and
Justin R DiAngelo, and
Amy T Hark, and
Matthew Skerritt, and
Matthew Wawersik, and
Anna K Allen, and
Consuelo Alvarez, and
Sara Anderson, and
Cindy Arrigo, and
Andrew Arsham, and
Daron Barnard, and
Christopher Bazinet, and
James E J Bedard, and
Indrani Bose, and
John M Braverman, and
Martin G Burg, and
Rebecca C Burgess, and
Paula Croonquist, and
Chunguang Du, and
Sondra Dubowsky, and
Heather Eisler, and
Matthew A Escobar, and
Michael Foulk, and
Emily Furbee, and
Thomas Giarla, and
Rivka L Glaser, and
Anya L Goodman, and
Yuying Gosser, and
Adam Haberman, and
Charles Hauser, and
Shan Hays, and
Carina E Howell, and
Jennifer Jemc, and
M Logan Johnson, and
Christopher J Jones, and
Lisa Kadlec, and
Jacob D Kagey, and
Kimberly L Keller, and
Jennifer Kennell, and
S Catherine Silver Key, and
Adam J Kleinschmit, and
Melissa Kleinschmit, and
Nighat P Kokan, and
Olga Ruiz Kopp, and
Meg M Laakso, and
Judith Leatherman, and
Lindsey J Long, and
Mollie Manier, and
Juan C Martinez-Cruzado, and
Luis F Matos, and
Amie Jo McClellan, and
Gerard McNeil, and
Evan Merkhofer, and
Vida Mingo, and
Hemlata Mistry, and
Elizabeth Mitchell, and
Nathan T Mortimer, and
Debaditya Mukhopadhyay, and
Jennifer Leigh Myka, and
Alexis Nagengast, and
Paul Overvoorde, and
Don Paetkau, and
Leocadia Paliulis, and
Susan Parrish, and
Mary Lai Preuss, and
James V Price, and
Nicholas A Pullen, and
Catherine Reinke, and
Dennis Revie, and
Srebrenka Robic, and
Jennifer A Roecklein-Canfield, and
Michael R Rubin, and
Takrima Sadikot, and
Jamie Siders Sanford, and
Maria Santisteban, and
Kenneth Saville, and
Stephanie Schroeder, and
Christopher D Shaffer, and
Karim A Sharif, and
Diane E Sklensky, and
Chiyedza Small, and
Mary Smith, and
Sheryl Smith, and
Rebecca Spokony, and
Aparna Sreenivasan, and
Joyce Stamm, and
Rachel Sterne-Marr, and
Katherine C Teeter, and
Justin Thackeray, and
Jeffrey S Thompson, and
Stephanie Toering Peters, and
Melanie Van Stry, and
Norma Velazquez-Ulloa, and
Cindy Wolfe, and
James Youngblom, and
Brian Yowler, and
Leming Zhou, and
Janie Brennan, and
Jeremy Buhler, and
Wilson Leung, and
Laura K Reed, and
Sarah C R Elgin
January 2023,
Biochemistry and molecular biology education : a bimonthly publication of the International Union of Biochemistry and Molecular Biology,
David Lopatto, and
Anne G Rosenwald, and
Justin R DiAngelo, and
Amy T Hark, and
Matthew Skerritt, and
Matthew Wawersik, and
Anna K Allen, and
Consuelo Alvarez, and
Sara Anderson, and
Cindy Arrigo, and
Andrew Arsham, and
Daron Barnard, and
Christopher Bazinet, and
James E J Bedard, and
Indrani Bose, and
John M Braverman, and
Martin G Burg, and
Rebecca C Burgess, and
Paula Croonquist, and
Chunguang Du, and
Sondra Dubowsky, and
Heather Eisler, and
Matthew A Escobar, and
Michael Foulk, and
Emily Furbee, and
Thomas Giarla, and
Rivka L Glaser, and
Anya L Goodman, and
Yuying Gosser, and
Adam Haberman, and
Charles Hauser, and
Shan Hays, and
Carina E Howell, and
Jennifer Jemc, and
M Logan Johnson, and
Christopher J Jones, and
Lisa Kadlec, and
Jacob D Kagey, and
Kimberly L Keller, and
Jennifer Kennell, and
S Catherine Silver Key, and
Adam J Kleinschmit, and
Melissa Kleinschmit, and
Nighat P Kokan, and
Olga Ruiz Kopp, and
Meg M Laakso, and
Judith Leatherman, and
Lindsey J Long, and
Mollie Manier, and
Juan C Martinez-Cruzado, and
Luis F Matos, and
Amie Jo McClellan, and
Gerard McNeil, and
Evan Merkhofer, and
Vida Mingo, and
Hemlata Mistry, and
Elizabeth Mitchell, and
Nathan T Mortimer, and
Debaditya Mukhopadhyay, and
Jennifer Leigh Myka, and
Alexis Nagengast, and
Paul Overvoorde, and
Don Paetkau, and
Leocadia Paliulis, and
Susan Parrish, and
Mary Lai Preuss, and
James V Price, and
Nicholas A Pullen, and
Catherine Reinke, and
Dennis Revie, and
Srebrenka Robic, and
Jennifer A Roecklein-Canfield, and
Michael R Rubin, and
Takrima Sadikot, and
Jamie Siders Sanford, and
Maria Santisteban, and
Kenneth Saville, and
Stephanie Schroeder, and
Christopher D Shaffer, and
Karim A Sharif, and
Diane E Sklensky, and
Chiyedza Small, and
Mary Smith, and
Sheryl Smith, and
Rebecca Spokony, and
Aparna Sreenivasan, and
Joyce Stamm, and
Rachel Sterne-Marr, and
Katherine C Teeter, and
Justin Thackeray, and
Jeffrey S Thompson, and
Stephanie Toering Peters, and
Melanie Van Stry, and
Norma Velazquez-Ulloa, and
Cindy Wolfe, and
James Youngblom, and
Brian Yowler, and
Leming Zhou, and
Janie Brennan, and
Jeremy Buhler, and
Wilson Leung, and
Laura K Reed, and
Sarah C R Elgin
January 2023,
Biochemistry and molecular biology education : a bimonthly publication of the International Union of Biochemistry and Molecular Biology,
