BIOMAT Database Logo BIOMAT Database Logo

Near-complete nucleotide sequence of a border disease virus genotype BDV-7 isolate from Italy. 2020

Moira Bazzucchi, and Ilaria Pierini, and Monica Giammarioli, and Gian Mario De Mia
Istituto Zooprofilattico Sperimentale dell'Umbria e delle Marche "Togo Rosati", via G. Salvemini, 1, 06126, Perugia, Italy.

To gain further insight into the genomic features of border disease virus (BDV), we determined the nearly complete genome sequence of isolate TO/121/04 from an aborted ovine fetus. Its genome contains a single open reading frame (ORF), which comprises 11,681 nucleotides encoding a polyprotein of 3893 amino acids. Phylogenetic analysis of the near full-length genome sequence showed that the BDV isolate differed significantly from all ovine pestiviruses identified so far, thus re-affirming the presence in Italy of this novel genetic group, termed BDV-7.

UI MeSH Term Description Entries
D007558 Italy A country in southern Europe, a peninsula extending into the central Mediterranean Sea, northeast of Tunisia. The capital is Rome. Sardinia
D010802 Phylogeny The relationships of groups of organisms as reflected by their genetic makeup. Community Phylogenetics,Molecular Phylogenetics,Phylogenetic Analyses,Phylogenetic Analysis,Phylogenetic Clustering,Phylogenetic Comparative Analysis,Phylogenetic Comparative Methods,Phylogenetic Distance,Phylogenetic Generalized Least Squares,Phylogenetic Groups,Phylogenetic Incongruence,Phylogenetic Inference,Phylogenetic Networks,Phylogenetic Reconstruction,Phylogenetic Relatedness,Phylogenetic Relationships,Phylogenetic Signal,Phylogenetic Structure,Phylogenetic Tree,Phylogenetic Trees,Phylogenomics,Analyse, Phylogenetic,Analysis, Phylogenetic,Analysis, Phylogenetic Comparative,Clustering, Phylogenetic,Community Phylogenetic,Comparative Analysis, Phylogenetic,Comparative Method, Phylogenetic,Distance, Phylogenetic,Group, Phylogenetic,Incongruence, Phylogenetic,Inference, Phylogenetic,Method, Phylogenetic Comparative,Molecular Phylogenetic,Network, Phylogenetic,Phylogenetic Analyse,Phylogenetic Clusterings,Phylogenetic Comparative Analyses,Phylogenetic Comparative Method,Phylogenetic Distances,Phylogenetic Group,Phylogenetic Incongruences,Phylogenetic Inferences,Phylogenetic Network,Phylogenetic Reconstructions,Phylogenetic Relatednesses,Phylogenetic Relationship,Phylogenetic Signals,Phylogenetic Structures,Phylogenetic, Community,Phylogenetic, Molecular,Phylogenies,Phylogenomic,Reconstruction, Phylogenetic,Relatedness, Phylogenetic,Relationship, Phylogenetic,Signal, Phylogenetic,Structure, Phylogenetic,Tree, Phylogenetic
D001882 Border Disease Congenital disorder of lambs caused by a virus closely related to or identical with certain strains of bovine viral diarrhea virus. Border Diseases
D005838 Genotype The genetic constitution of the individual, comprising the ALLELES present at each GENETIC LOCUS. Genogroup,Genogroups,Genotypes
D000595 Amino Acid Sequence The order of amino acids as they occur in a polypeptide chain. This is referred to as the primary structure of proteins. It is of fundamental importance in determining PROTEIN CONFORMATION. Protein Structure, Primary,Amino Acid Sequences,Sequence, Amino Acid,Sequences, Amino Acid,Primary Protein Structure,Primary Protein Structures,Protein Structures, Primary,Structure, Primary Protein,Structures, Primary Protein
D000818 Animals Unicellular or multicellular, heterotrophic organisms, that have sensation and the power of voluntary movement. Under the older five kingdom paradigm, Animalia was one of the kingdoms. Under the modern three domain model, Animalia represents one of the many groups in the domain EUKARYOTA. Animal,Metazoa,Animalia
D012756 Sheep Any of the ruminant mammals with curved horns in the genus Ovis, family Bovidae. They possess lachrymal grooves and interdigital glands, which are absent in GOATS. Ovis,Sheep, Dall,Dall Sheep,Ovis dalli
D016366 Open Reading Frames A sequence of successive nucleotide triplets that are read as CODONS specifying AMINO ACIDS and begin with an INITIATOR CODON and end with a stop codon (CODON, TERMINATOR). ORFs,Protein Coding Region,Small Open Reading Frame,Small Open Reading Frames,sORF,Unassigned Reading Frame,Unassigned Reading Frames,Unidentified Reading Frame,Coding Region, Protein,Frame, Unidentified Reading,ORF,Open Reading Frame,Protein Coding Regions,Reading Frame, Open,Reading Frame, Unassigned,Reading Frame, Unidentified,Region, Protein Coding,Unidentified Reading Frames
D016679 Genome, Viral The complete genetic complement contained in a DNA or RNA molecule in a virus. Viral Genome,Genomes, Viral,Viral Genomes
D018083 Border disease virus A species of PESTIVIRUS causing a congenital sheep disease characterized by an abnormally hairy birth-coat, tremors, and poor growth.

Related Publications

Moira Bazzucchi, and Ilaria Pierini, and Monica Giammarioli, and Gian Mario De Mia
Complete nucleotide sequence of a novel bovine viral diarrhea virus subtype 1 isolate from Italy.
November 2017, Archives of virology,
Moira Bazzucchi, and Ilaria Pierini, and Monica Giammarioli, and Gian Mario De Mia
Genetic characterization of border disease virus (BDV) isolates from small ruminants in Italy.
April 2015, Virus genes,
Moira Bazzucchi, and Ilaria Pierini, and Monica Giammarioli, and Gian Mario De Mia
Genetic and antigenic typing of border disease virus (BDV) isolates from Italy reveals the existence of a novel BDV group.
January 2011, Veterinary microbiology,
Moira Bazzucchi, and Ilaria Pierini, and Monica Giammarioli, and Gian Mario De Mia
Detection of border disease virus (BDV) genotype 3 in Italian goat herds.
March 2014, Veterinary journal (London, England : 1997),
Moira Bazzucchi, and Ilaria Pierini, and Monica Giammarioli, and Gian Mario De Mia
Complete genome sequence of border disease virus genotype 3 strain gifhorn.
January 2014, Genome announcements,
Moira Bazzucchi, and Ilaria Pierini, and Monica Giammarioli, and Gian Mario De Mia
Erratum to: Genetic characterization of border disease virus (BDV) isolates from small ruminants in Italy.
June 2015, Virus genes,
Moira Bazzucchi, and Ilaria Pierini, and Monica Giammarioli, and Gian Mario De Mia
Complete nucleotide sequence of a maize chlorotic mottle virus isolate from Nebraska.
January 2008, Archives of virology,
Moira Bazzucchi, and Ilaria Pierini, and Monica Giammarioli, and Gian Mario De Mia
Complete Genome Sequence of a Tomato Isolate of Parietaria Mottle Virus from Italy.
December 2015, Genome announcements,
Moira Bazzucchi, and Ilaria Pierini, and Monica Giammarioli, and Gian Mario De Mia
Complete nucleotide sequence of a carrot isolate of Carrot mottle virus from Germany.
January 2008, Archives of virology,
Moira Bazzucchi, and Ilaria Pierini, and Monica Giammarioli, and Gian Mario De Mia
Complete nucleotide sequence of a strawberry isolate of Beet pseudoyellows virus.
April 2004, Virus genes,
Copied contents to your clipboard!