Single-molecule sequencing yields the complete chloroplast genome sequence of Populus deltoides. 2019

Dongyang Wu, and Yupeng Wang, and Donghua Wu, and Lijun Dou, and Linming Gao
College of Information Science and Technology, Nanjing Forestry University, Nanjing, Jiangsu, China.

Populus deltoides is a fast-growing, large tree and one of the largest North American hardwood trees. In this study, the complete chloroplast (cp) genome sequence of P. deltoides is characterized. The whole cp genome was assembled to 156,867 bp, including a large single copy (LSC) region of 85,534 bp, a small single copy (SSC) region of 16,513 bp and a pair of inverted repeats (IRs) region of 27,410 bp. The base content of the P. deltoides cp genome is A (32.0%), T (31.3%), C (18.0%), and G (18.7%), and AT bases occupy a large proportion of the cp genome. The neighbor-joining phylogenetic analysis with 20 cp genomes from the Salicaceae family showed that P. deltoides is sister to Populus davidiana. These will provide for the evolutionary and biological studies in Salicaceae family.

UI MeSH Term Description Entries

Related Publications

Dongyang Wu, and Yupeng Wang, and Donghua Wu, and Lijun Dou, and Linming Gao
December 2019, Mitochondrial DNA. Part B, Resources,
Dongyang Wu, and Yupeng Wang, and Donghua Wu, and Lijun Dou, and Linming Gao
February 2021, Mitochondrial DNA. Part B, Resources,
Dongyang Wu, and Yupeng Wang, and Donghua Wu, and Lijun Dou, and Linming Gao
November 2020, Mitochondrial DNA. Part B, Resources,
Dongyang Wu, and Yupeng Wang, and Donghua Wu, and Lijun Dou, and Linming Gao
September 2016, Mitochondrial DNA. Part B, Resources,
Dongyang Wu, and Yupeng Wang, and Donghua Wu, and Lijun Dou, and Linming Gao
November 2019, Mitochondrial DNA. Part B, Resources,
Dongyang Wu, and Yupeng Wang, and Donghua Wu, and Lijun Dou, and Linming Gao
January 2020, Mitochondrial DNA. Part B, Resources,
Dongyang Wu, and Yupeng Wang, and Donghua Wu, and Lijun Dou, and Linming Gao
December 2019, Mitochondrial DNA. Part B, Resources,
Dongyang Wu, and Yupeng Wang, and Donghua Wu, and Lijun Dou, and Linming Gao
January 2020, Mitochondrial DNA. Part B, Resources,
Dongyang Wu, and Yupeng Wang, and Donghua Wu, and Lijun Dou, and Linming Gao
January 2020, Mitochondrial DNA. Part B, Resources,
Dongyang Wu, and Yupeng Wang, and Donghua Wu, and Lijun Dou, and Linming Gao
January 2016, Mitochondrial DNA. Part A, DNA mapping, sequencing, and analysis,
Copied contents to your clipboard!