The construction and modulation of hierarchical pore structure in metal-organic frameworks (MOFs) has become a hot topic owing to the advantages of hierarchical pore MOFs (HP-MOFs) in matter storage and mass transfer related applications. Herein, we report the engineering of crystalline defect in a bimetallic MOF for the construction and tuning of HP-MOF. A microporous MOF system showing metal-center-dependent water stability, namely, {[M3F(bdc)3 tpt] (solvents)} (M = Zn2+ and Ni2+, H2bdc = 1,4-benzenedicarboxylic acid, tpt = 2,4,6-tris(4-pyridyl)triazine), was utilized as a platform for the construction of HP-MOF. By tuning the Zn2+/Ni2+ ratio in the reactant, a bimetallic MOF with a highly tunable Zn2+/Ni2+ ratio could be obtained. The relatively labile Zn2+-based coordination bonding in the bimetallic MOF could be readily and targeted broken through water treatment for the engineering of crystalline defects-based hierarchical pore structure. The resultant HP-MOF reveals a dramatically increased pore volume with the presence of mesopore and macropore. In addition, the anionic framework of HP-MOF could be utilized for the selective adsorption of a cationic dye methylene blue, and a relatively high capacity (250 mg·g-1, five times compared with the pristine microporous MOF) could be achieved.