A 5,000-year-old hunter-gatherer already plagued by Yersinia pestis. 2021

Julian Susat, and Harald Lübke, and Alexander Immel, and Ute Brinker, and Aija Macāne, and John Meadows, and Britta Steer, and Andreas Tholey, and Ilga Zagorska, and Guntis Gerhards, and Ulrich Schmölcke, and Mārcis Kalniņš, and Andre Franke, and Elīna Pētersone-Gordina, and Barbara Teßman, and Mari Tõrv, and Stefan Schreiber, and Christian Andree, and Valdis Bērziņš, and Almut Nebel, and Ben Krause-Kyora
Institute of Clinical Molecular Biology, Kiel University, Rosalind-Franklin-Str. 12, 24105 Kiel, Germany.

A 5,000-year-old Yersinia pestis genome (RV 2039) is reconstructed from a hunter-fisher-gatherer (5300-5050 cal BP) buried at Riņņukalns, Latvia. RV 2039 is the first in a series of ancient strains that evolved shortly after the split of Y. pestis from its antecessor Y. pseudotuberculosis ∼7,000 years ago. The genomic and phylogenetic characteristics of RV 2039 are consistent with the hypothesis that this very early Y. pestis form was most likely less transmissible and maybe even less virulent than later strains. Our data do not support the scenario of a prehistoric pneumonic plague pandemic, as suggested previously for the Neolithic decline. The geographical and temporal distribution of the few prehistoric Y. pestis cases reported so far is more in agreement with single zoonotic events.

UI MeSH Term Description Entries
D007844 Latvia A country located in Eastern Europe, bordering the Baltic Sea, between Estonia and Lithuania. The capital is Riga. Republic of Latvia
D010802 Phylogeny The relationships of groups of organisms as reflected by their genetic makeup. Community Phylogenetics,Molecular Phylogenetics,Phylogenetic Analyses,Phylogenetic Analysis,Phylogenetic Clustering,Phylogenetic Comparative Analysis,Phylogenetic Comparative Methods,Phylogenetic Distance,Phylogenetic Generalized Least Squares,Phylogenetic Groups,Phylogenetic Incongruence,Phylogenetic Inference,Phylogenetic Networks,Phylogenetic Reconstruction,Phylogenetic Relatedness,Phylogenetic Relationships,Phylogenetic Signal,Phylogenetic Structure,Phylogenetic Tree,Phylogenetic Trees,Phylogenomics,Analyse, Phylogenetic,Analysis, Phylogenetic,Analysis, Phylogenetic Comparative,Clustering, Phylogenetic,Community Phylogenetic,Comparative Analysis, Phylogenetic,Comparative Method, Phylogenetic,Distance, Phylogenetic,Group, Phylogenetic,Incongruence, Phylogenetic,Inference, Phylogenetic,Method, Phylogenetic Comparative,Molecular Phylogenetic,Network, Phylogenetic,Phylogenetic Analyse,Phylogenetic Clusterings,Phylogenetic Comparative Analyses,Phylogenetic Comparative Method,Phylogenetic Distances,Phylogenetic Group,Phylogenetic Incongruences,Phylogenetic Inferences,Phylogenetic Network,Phylogenetic Reconstructions,Phylogenetic Relatednesses,Phylogenetic Relationship,Phylogenetic Signals,Phylogenetic Structures,Phylogenetic, Community,Phylogenetic, Molecular,Phylogenies,Phylogenomic,Reconstruction, Phylogenetic,Relatedness, Phylogenetic,Relationship, Phylogenetic,Signal, Phylogenetic,Structure, Phylogenetic,Tree, Phylogenetic
D010930 Plague An acute infectious disease caused by YERSINIA PESTIS that affects humans, wild rodents, and their ectoparasites. This condition persists due to its firm entrenchment in sylvatic rodent-flea ecosystems throughout the world. Bubonic plague is the most common form. Bubonic Plague,Meningeal Plague,Pneumonic Plague,Pulmonic Plague,Black Death,Black Plague,Septicemic Plague,Yersinia pestis Infection
D006801 Humans Members of the species Homo sapiens. Homo sapiens,Man (Taxonomy),Human,Man, Modern,Modern Man
D015010 Yersinia pestis The etiologic agent of PLAGUE in man, rats, ground squirrels, and other rodents. Bacillus pestis,Bacterium pestis,Pasteurella pestis,Pestisella pestis,Yersinia pseudotuberculosis subsp. pestis
D016013 Likelihood Functions Functions constructed from a statistical model and a set of observed data which give the probability of that data for various values of the unknown model parameters. Those parameter values that maximize the probability are the maximum likelihood estimates of the parameters. Likelihood Ratio Test,Maximum Likelihood Estimates,Estimate, Maximum Likelihood,Estimates, Maximum Likelihood,Function, Likelihood,Functions, Likelihood,Likelihood Function,Maximum Likelihood Estimate,Test, Likelihood Ratio

Related Publications

Julian Susat, and Harald Lübke, and Alexander Immel, and Ute Brinker, and Aija Macāne, and John Meadows, and Britta Steer, and Andreas Tholey, and Ilga Zagorska, and Guntis Gerhards, and Ulrich Schmölcke, and Mārcis Kalniņš, and Andre Franke, and Elīna Pētersone-Gordina, and Barbara Teßman, and Mari Tõrv, and Stefan Schreiber, and Christian Andree, and Valdis Bērziņš, and Almut Nebel, and Ben Krause-Kyora
January 2012, PloS one,
Julian Susat, and Harald Lübke, and Alexander Immel, and Ute Brinker, and Aija Macāne, and John Meadows, and Britta Steer, and Andreas Tholey, and Ilga Zagorska, and Guntis Gerhards, and Ulrich Schmölcke, and Mārcis Kalniņš, and Andre Franke, and Elīna Pētersone-Gordina, and Barbara Teßman, and Mari Tõrv, and Stefan Schreiber, and Christian Andree, and Valdis Bērziņš, and Almut Nebel, and Ben Krause-Kyora
January 2023, Communications biology,
Julian Susat, and Harald Lübke, and Alexander Immel, and Ute Brinker, and Aija Macāne, and John Meadows, and Britta Steer, and Andreas Tholey, and Ilga Zagorska, and Guntis Gerhards, and Ulrich Schmölcke, and Mārcis Kalniņš, and Andre Franke, and Elīna Pētersone-Gordina, and Barbara Teßman, and Mari Tõrv, and Stefan Schreiber, and Christian Andree, and Valdis Bērziņš, and Almut Nebel, and Ben Krause-Kyora
October 2015, Cell,
Julian Susat, and Harald Lübke, and Alexander Immel, and Ute Brinker, and Aija Macāne, and John Meadows, and Britta Steer, and Andreas Tholey, and Ilga Zagorska, and Guntis Gerhards, and Ulrich Schmölcke, and Mārcis Kalniņš, and Andre Franke, and Elīna Pētersone-Gordina, and Barbara Teßman, and Mari Tõrv, and Stefan Schreiber, and Christian Andree, and Valdis Bērziņš, and Almut Nebel, and Ben Krause-Kyora
January 1980, Science (New York, N.Y.),
Julian Susat, and Harald Lübke, and Alexander Immel, and Ute Brinker, and Aija Macāne, and John Meadows, and Britta Steer, and Andreas Tholey, and Ilga Zagorska, and Guntis Gerhards, and Ulrich Schmölcke, and Mārcis Kalniņš, and Andre Franke, and Elīna Pētersone-Gordina, and Barbara Teßman, and Mari Tõrv, and Stefan Schreiber, and Christian Andree, and Valdis Bērziņš, and Almut Nebel, and Ben Krause-Kyora
May 2004, Mayo Clinic proceedings,
Julian Susat, and Harald Lübke, and Alexander Immel, and Ute Brinker, and Aija Macāne, and John Meadows, and Britta Steer, and Andreas Tholey, and Ilga Zagorska, and Guntis Gerhards, and Ulrich Schmölcke, and Mārcis Kalniņš, and Andre Franke, and Elīna Pētersone-Gordina, and Barbara Teßman, and Mari Tõrv, and Stefan Schreiber, and Christian Andree, and Valdis Bērziņš, and Almut Nebel, and Ben Krause-Kyora
March 2000, The American journal of clinical nutrition,
Julian Susat, and Harald Lübke, and Alexander Immel, and Ute Brinker, and Aija Macāne, and John Meadows, and Britta Steer, and Andreas Tholey, and Ilga Zagorska, and Guntis Gerhards, and Ulrich Schmölcke, and Mārcis Kalniņš, and Andre Franke, and Elīna Pētersone-Gordina, and Barbara Teßman, and Mari Tõrv, and Stefan Schreiber, and Christian Andree, and Valdis Bērziņš, and Almut Nebel, and Ben Krause-Kyora
January 2012, Nature,
Julian Susat, and Harald Lübke, and Alexander Immel, and Ute Brinker, and Aija Macāne, and John Meadows, and Britta Steer, and Andreas Tholey, and Ilga Zagorska, and Guntis Gerhards, and Ulrich Schmölcke, and Mārcis Kalniņš, and Andre Franke, and Elīna Pētersone-Gordina, and Barbara Teßman, and Mari Tõrv, and Stefan Schreiber, and Christian Andree, and Valdis Bērziņš, and Almut Nebel, and Ben Krause-Kyora
January 1991, In vivo (Athens, Greece),
Julian Susat, and Harald Lübke, and Alexander Immel, and Ute Brinker, and Aija Macāne, and John Meadows, and Britta Steer, and Andreas Tholey, and Ilga Zagorska, and Guntis Gerhards, and Ulrich Schmölcke, and Mārcis Kalniņš, and Andre Franke, and Elīna Pētersone-Gordina, and Barbara Teßman, and Mari Tõrv, and Stefan Schreiber, and Christian Andree, and Valdis Bērziņš, and Almut Nebel, and Ben Krause-Kyora
June 1997, Trends in ecology & evolution,
Julian Susat, and Harald Lübke, and Alexander Immel, and Ute Brinker, and Aija Macāne, and John Meadows, and Britta Steer, and Andreas Tholey, and Ilga Zagorska, and Guntis Gerhards, and Ulrich Schmölcke, and Mārcis Kalniņš, and Andre Franke, and Elīna Pētersone-Gordina, and Barbara Teßman, and Mari Tõrv, and Stefan Schreiber, and Christian Andree, and Valdis Bērziņš, and Almut Nebel, and Ben Krause-Kyora
January 2016, Royal Society open science,
Copied contents to your clipboard!