Gene expression profiles of specific chicken skeletal muscles. 2022

Hua Kui, and Bo Ran, and Maosen Yang, and Xin Shi, and Yingyu Luo, and Yujie Wang, and Tao Wang, and Diyan Li, and Surong Shuai, and Mingzhou Li
Institute of Animal Genetics and Breeding, College of Animal Science and Technology, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China.

The chicken provides large amounts of protein for the human diet and is also used as a model organism for biomedical research. Increasing meat production is an important goal in the poultry industry and skeletal muscles have highly diverse origins, shapes, metabolic features, and physical functions. Previous gene expression atlases have largely ignored the differences among diverse types of skeletal muscles; therefore, comprehensive transcriptional maps of all skeletal muscles are needed to improve meat production traits. In this study, we sequenced 58 samples from 10 different skeletal muscles of 42-day-old White Plymouth Rock chickens. We also measured myofiber diameter and generated myofiber-type datasets of these 10 tissues. We generated 418.4 Gb high-quality bulk RNA-Seq data from four or six biological replicates of each skeletal muscle (four replicates from extraocular samples) (approximately 7.4 Gb per sample). This dataset provides valuable information for understanding the muscle fiber characteristics of White Plymouth Rock chickens. Furthermore, our data can be used as a model for heterogeneity analysis between tissues with similar properties.

UI MeSH Term Description Entries
D008460 Meat The edible portions of any animal used for food including cattle, swine, goats/sheep, poultry, fish, shellfish, and game. Meats
D002645 Chickens Common name for the species Gallus gallus, the domestic fowl, in the family Phasianidae, order GALLIFORMES. It is descended from the red jungle fowl of SOUTHEAST ASIA. Gallus gallus,Gallus domesticus,Gallus gallus domesticus,Chicken
D000818 Animals Unicellular or multicellular, heterotrophic organisms, that have sensation and the power of voluntary movement. Under the older five kingdom paradigm, Animalia was one of the kingdoms. Under the modern three domain model, Animalia represents one of the many groups in the domain EUKARYOTA. Animal,Metazoa,Animalia
D059467 Transcriptome The pattern of GENE EXPRESSION at the level of genetic transcription in a specific organism or under specific circumstances in specific cells. Transcriptomes,Gene Expression Profiles,Gene Expression Signatures,Transcriptome Profiles,Expression Profile, Gene,Expression Profiles, Gene,Expression Signature, Gene,Expression Signatures, Gene,Gene Expression Profile,Gene Expression Signature,Profile, Gene Expression,Profile, Transcriptome,Profiles, Gene Expression,Profiles, Transcriptome,Signature, Gene Expression,Signatures, Gene Expression,Transcriptome Profile
D018482 Muscle, Skeletal A subtype of striated muscle, attached by TENDONS to the SKELETON. Skeletal muscles are innervated and their movement can be consciously controlled. They are also called voluntary muscles. Anterior Tibial Muscle,Gastrocnemius Muscle,Muscle, Voluntary,Plantaris Muscle,Skeletal Muscle,Soleus Muscle,Muscle, Anterior Tibial,Muscle, Gastrocnemius,Muscle, Plantaris,Muscle, Soleus,Muscles, Skeletal,Muscles, Voluntary,Skeletal Muscles,Tibial Muscle, Anterior,Voluntary Muscle,Voluntary Muscles
D018485 Muscle Fibers, Skeletal Large, multinucleate single cells, either cylindrical or prismatic in shape, that form the basic unit of SKELETAL MUSCLE. They consist of MYOFIBRILS enclosed within and attached to the SARCOLEMMA. They are derived from the fusion of skeletal myoblasts (MYOBLASTS, SKELETAL) into a syncytium, followed by differentiation. Myocytes, Skeletal,Myotubes,Skeletal Myocytes,Skeletal Muscle Fibers,Fiber, Skeletal Muscle,Fibers, Skeletal Muscle,Muscle Fiber, Skeletal,Myocyte, Skeletal,Myotube,Skeletal Muscle Fiber,Skeletal Myocyte

Related Publications

Hua Kui, and Bo Ran, and Maosen Yang, and Xin Shi, and Yingyu Luo, and Yujie Wang, and Tao Wang, and Diyan Li, and Surong Shuai, and Mingzhou Li
October 2021, Genes,
Hua Kui, and Bo Ran, and Maosen Yang, and Xin Shi, and Yingyu Luo, and Yujie Wang, and Tao Wang, and Diyan Li, and Surong Shuai, and Mingzhou Li
September 1995, British poultry science,
Hua Kui, and Bo Ran, and Maosen Yang, and Xin Shi, and Yingyu Luo, and Yujie Wang, and Tao Wang, and Diyan Li, and Surong Shuai, and Mingzhou Li
October 1993, Journal of biochemistry,
Hua Kui, and Bo Ran, and Maosen Yang, and Xin Shi, and Yingyu Luo, and Yujie Wang, and Tao Wang, and Diyan Li, and Surong Shuai, and Mingzhou Li
June 2013, BMC genetics,
Hua Kui, and Bo Ran, and Maosen Yang, and Xin Shi, and Yingyu Luo, and Yujie Wang, and Tao Wang, and Diyan Li, and Surong Shuai, and Mingzhou Li
June 2007, BMC molecular biology,
Hua Kui, and Bo Ran, and Maosen Yang, and Xin Shi, and Yingyu Luo, and Yujie Wang, and Tao Wang, and Diyan Li, and Surong Shuai, and Mingzhou Li
January 2012, PloS one,
Hua Kui, and Bo Ran, and Maosen Yang, and Xin Shi, and Yingyu Luo, and Yujie Wang, and Tao Wang, and Diyan Li, and Surong Shuai, and Mingzhou Li
June 2006, Science in China. Series C, Life sciences,
Hua Kui, and Bo Ran, and Maosen Yang, and Xin Shi, and Yingyu Luo, and Yujie Wang, and Tao Wang, and Diyan Li, and Surong Shuai, and Mingzhou Li
November 2020, Journal of animal science,
Hua Kui, and Bo Ran, and Maosen Yang, and Xin Shi, and Yingyu Luo, and Yujie Wang, and Tao Wang, and Diyan Li, and Surong Shuai, and Mingzhou Li
January 2012, Methods in molecular biology (Clifton, N.J.),
Hua Kui, and Bo Ran, and Maosen Yang, and Xin Shi, and Yingyu Luo, and Yujie Wang, and Tao Wang, and Diyan Li, and Surong Shuai, and Mingzhou Li
February 2017, American journal of physiology. Cell physiology,
Copied contents to your clipboard!