Nursing Informatics and Epigenetics: Methodological Considerations for Big Data Analysis. 2023

John J Milner, and Julie K Zadinsky, and S Pamela K Shiao
Author Affiliations : College of Nursing (Drs Milner and Zadinsky) and Center for Biotechnology and Genomic Medicine, Medical College of Georgia (Dr Shiao), Augusta University, GA.

Nursing informatics requires an understanding of patient-centered data and clinical workflow, and epigenetic research requires an understanding of data analysis. The purpose of this article is to document the methodology that nursing informatics specialists can use to conduct epigenetic research and subsequently strengthen patient-centered care. A pilot study of a secondary methylation data analysis using The Cancer Genome Atlas data from individuals with colon cancer is utilized to illustrate the methodology. The steps for conducting the study using public and free resources are discussed. These steps include finding a data source; downloading and analyzing differentially methylated regions; annotating differentially methylated region, gene ontology and function analysis; and reporting results. A model of epigenetic testing workflow is provided, as is a list of publicly available data and analysis sources that can be used to conduct epigenetic research.

UI MeSH Term Description Entries
D010865 Pilot Projects Small-scale tests of methods and procedures to be used on a larger scale if the pilot study demonstrates that these methods and procedures can work. Pilot Studies,Pilot Study,Pilot Project,Project, Pilot,Projects, Pilot,Studies, Pilot,Study, Pilot
D006801 Humans Members of the species Homo sapiens. Homo sapiens,Man (Taxonomy),Human,Man, Modern,Modern Man
D000077558 Big Data Extremely large amounts of data which require rapid and often complex computational analyses to reveal patterns, trends, and associations, relating to various facets of human and non-human entities.
D000078332 Data Analysis Process of systematically applying statistical and/or logical techniques to describe and illustrate, condense and recap, and evaluate data (https://ori.hhs.gov/education). Analyses, Data,Analysis, Data,Data Analyses
D048108 Nursing Informatics The field of information science concerned with the analysis and dissemination of data through the application of computers applied to the field of nursing. Informatics, Nursing

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