Transcription Factor Dynamics: One Molecule at a Time. 2023

Kaustubh Wagh, and Diana A Stavreva, and Arpita Upadhyaya, and Gordon L Hager
Laboratory of Receptor Biology and Gene Expression, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, USA; email: kaustubh.wagh@nih.gov, stavrevd@mail.nih.gov, hagerg@exchange.nih.gov.

Cells must tightly regulate their gene expression programs and yet rapidly respond to acute biochemical and biophysical cues within their environment. This information is transmitted to the nucleus through various signaling cascades, culminating in the activation or repression of target genes. Transcription factors (TFs) are key mediators of these signals, binding to specific regulatory elements within chromatin. While live-cell imaging has conclusively proven that TF-chromatin interactions are highly dynamic, how such transient interactions can have long-term impacts on developmental trajectories and disease progression is still largely unclear. In this review, we summarize our current understanding of the dynamic nature of TF functions, starting with a historical overview of early live-cell experiments. We highlight key factors that govern TF dynamics and how TF dynamics, in turn, affect downstream transcriptional bursting. Finally, we conclude with open challenges and emerging technologies that will further our understanding of transcriptional regulation.

UI MeSH Term Description Entries
D012045 Regulatory Sequences, Nucleic Acid Nucleic acid sequences involved in regulating the expression of genes. Nucleic Acid Regulatory Sequences,Regulatory Regions, Nucleic Acid (Genetics),Region, Regulatory,Regions, Regulatory,Regulator Regions, Nucleic Acid,Regulatory Region,Regulatory Regions
D002843 Chromatin The material of CHROMOSOMES. It is a complex of DNA; HISTONES; and nonhistone proteins (CHROMOSOMAL PROTEINS, NON-HISTONE) found within the nucleus of a cell. Chromatins
D005786 Gene Expression Regulation Any of the processes by which nuclear, cytoplasmic, or intercellular factors influence the differential control (induction or repression) of gene action at the level of transcription or translation. Gene Action Regulation,Regulation of Gene Expression,Expression Regulation, Gene,Regulation, Gene Action,Regulation, Gene Expression
D014157 Transcription Factors Endogenous substances, usually proteins, which are effective in the initiation, stimulation, or termination of the genetic transcription process. Transcription Factor,Factor, Transcription,Factors, Transcription

Related Publications

Kaustubh Wagh, and Diana A Stavreva, and Arpita Upadhyaya, and Gordon L Hager
April 2015, Proceedings of the National Academy of Sciences of the United States of America,
Kaustubh Wagh, and Diana A Stavreva, and Arpita Upadhyaya, and Gordon L Hager
April 2021, Essays in biochemistry,
Kaustubh Wagh, and Diana A Stavreva, and Arpita Upadhyaya, and Gordon L Hager
May 1999, The Journal of biological chemistry,
Kaustubh Wagh, and Diana A Stavreva, and Arpita Upadhyaya, and Gordon L Hager
May 1998, Analytical chemistry,
Kaustubh Wagh, and Diana A Stavreva, and Arpita Upadhyaya, and Gordon L Hager
November 2013, Cell cycle (Georgetown, Tex.),
Kaustubh Wagh, and Diana A Stavreva, and Arpita Upadhyaya, and Gordon L Hager
May 2009, Trends in biochemical sciences,
Kaustubh Wagh, and Diana A Stavreva, and Arpita Upadhyaya, and Gordon L Hager
June 2012, Nature nanotechnology,
Kaustubh Wagh, and Diana A Stavreva, and Arpita Upadhyaya, and Gordon L Hager
March 2016, Biological psychiatry,
Kaustubh Wagh, and Diana A Stavreva, and Arpita Upadhyaya, and Gordon L Hager
January 2010, Genome biology,
Kaustubh Wagh, and Diana A Stavreva, and Arpita Upadhyaya, and Gordon L Hager
May 2007, Science (New York, N.Y.),
Copied contents to your clipboard!