Yolk sac cell atlas reveals multiorgan functions during human early development. 2023

Issac Goh, and Rachel A Botting, and Antony Rose, and Simone Webb, and Justin Engelbert, and Yorick Gitton, and Emily Stephenson, and Mariana Quiroga Londoño, and Michael Mather, and Nicole Mende, and Ivan Imaz-Rosshandler, and Lu Yang, and Dave Horsfall, and Daniela Basurto-Lozada, and Nana-Jane Chipampe, and Victoria Rook, and Jimmy Tsz Hang Lee, and Mai-Linh Ton, and Daniel Keitley, and Pavel Mazin, and M S Vijayabaskar, and Rebecca Hannah, and Laure Gambardella, and Kile Green, and Stephane Ballereau, and Megumi Inoue, and Elizabeth Tuck, and Valentina Lorenzi, and Kwasi Kwakwa, and Clara Alsinet, and Bayanne Olabi, and Mohi Miah, and Chloe Admane, and Dorin-Mirel Popescu, and Meghan Acres, and David Dixon, and Thomas Ness, and Rowen Coulthard, and Steven Lisgo, and Deborah J Henderson, and Emma Dann, and Chenqu Suo, and Sarah J Kinston, and Jong-Eun Park, and Krzysztof Polanski, and John Marioni, and Stijn van Dongen, and Kerstin B Meyer, and Marella de Bruijn, and James Palis, and Sam Behjati, and Elisa Laurenti, and Nicola K Wilson, and Roser Vento-Tormo, and Alain Chédotal, and Omer Bayraktar, and Irene Roberts, and Laura Jardine, and Berthold Göttgens, and Sarah A Teichmann, and Muzlifah Haniffa
Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SA, UK.

The extraembryonic yolk sac (YS) ensures delivery of nutritional support and oxygen to the developing embryo but remains ill-defined in humans. We therefore assembled a comprehensive multiomic reference of the human YS from 3 to 8 postconception weeks by integrating single-cell protein and gene expression data. Beyond its recognized role as a site of hematopoiesis, we highlight roles in metabolism, coagulation, vascular development, and hematopoietic regulation. We reconstructed the emergence and decline of YS hematopoietic stem and progenitor cells from hemogenic endothelium and revealed a YS-specific accelerated route to macrophage production that seeds developing organs. The multiorgan functions of the YS are superseded as intraembryonic organs develop, effecting a multifaceted relay of vital functions as pregnancy proceeds.

UI MeSH Term Description Entries
D008099 Liver A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances. Livers
D008264 Macrophages The relatively long-lived phagocytic cell of mammalian tissues that are derived from blood MONOCYTES. Main types are PERITONEAL MACROPHAGES; ALVEOLAR MACROPHAGES; HISTIOCYTES; KUPFFER CELLS of the liver; and OSTEOCLASTS. They may further differentiate within chronic inflammatory lesions to EPITHELIOID CELLS or may fuse to form FOREIGN BODY GIANT CELLS or LANGHANS GIANT CELLS. (from The Dictionary of Cell Biology, Lackie and Dow, 3rd ed.) Bone Marrow-Derived Macrophages,Monocyte-Derived Macrophages,Macrophage,Macrophages, Monocyte-Derived,Bone Marrow Derived Macrophages,Bone Marrow-Derived Macrophage,Macrophage, Bone Marrow-Derived,Macrophage, Monocyte-Derived,Macrophages, Bone Marrow-Derived,Macrophages, Monocyte Derived,Monocyte Derived Macrophages,Monocyte-Derived Macrophage
D011247 Pregnancy The status during which female mammals carry their developing young (EMBRYOS or FETUSES) in utero before birth, beginning from FERTILIZATION to BIRTH. Gestation,Pregnancies
D001777 Blood Coagulation The process of the interaction of BLOOD COAGULATION FACTORS that results in an insoluble FIBRIN clot. Blood Clotting,Coagulation, Blood,Blood Clottings,Clotting, Blood
D005260 Female Females
D006410 Hematopoiesis The development and formation of various types of BLOOD CELLS. Hematopoiesis can take place in the BONE MARROW (medullary) or outside the bone marrow (HEMATOPOIESIS, EXTRAMEDULLARY). Hematopoiesis, Medullary,Haematopoiesis,Medullary Hematopoiesis
D006801 Humans Members of the species Homo sapiens. Homo sapiens,Man (Taxonomy),Human,Man, Modern,Modern Man
D001271 Atlases as Topic Works about collections of illustrative plates and charts.. Atlases as Topics
D015017 Yolk Sac The first of four extra-embryonic membranes to form during EMBRYOGENESIS. In REPTILES and BIRDS, it arises from endoderm and mesoderm to incorporate the EGG YOLK into the DIGESTIVE TRACT for nourishing the embryo. In placental MAMMALS, its nutritional function is vestigial; however, it is the source of INTESTINAL MUCOSA; BLOOD CELLS; and GERM CELLS. It is sometimes called the vitelline sac, which should not be confused with the VITELLINE MEMBRANE of the egg. Vitelline Sac of Embryo,Embryo Vitelline Sac,Embryo Vitelline Sacs,Sac, Yolk,Sacs, Yolk,Yolk Sacs
D015870 Gene Expression The phenotypic manifestation of a gene or genes by the processes of GENETIC TRANSCRIPTION and GENETIC TRANSLATION. Expression, Gene,Expressions, Gene,Gene Expressions

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