In vitro transcription of human mitochondrial DNA. Identification of specific light strand transcripts from the displacement loop region. 1983

M W Walberg, and D A Clayton

The displacement loop region of human mitochondrial DNA contains the origin of heavy strand DNA replication and is the most likely site of promotion of transcription of both heavy and light strands. In order to identify relevant control regions for initiation of transcription, a partially purified human mitochondrial RNA polymerase activity was isolated and utilized in a runoff transcription assay using a cloned portion of the displacement loop region as the DNA template. Analysis of the transcription products from differentially cleaved DNA templates reveals that specific light strand transcripts are synthesized and no heavy strand transcripts are detectable. The 5' ends of the light strand transcripts map within a unique trinucleotide site on the heavy strand template at a position which overlaps the pentanucleotide map position of the 5' ends of in vivo 7 S RNA light strand transcripts. By using templates that have been truncated at the 5' or 3' end, an upper limit on the size of template sequence required for synthesis of the specific light sequence required for synthesis of the specific light strand transcripts can be defined as the 433-nucleotide genomic region between the 5' 10 nucleotides of the 12 S rRNA gene and a BalI restriction site in the displacement loop region that is 352 nucleotides from the gene boundary for tRNAPhe. Two of the previously identified conserved sequences of the mammalian displacement loop region are not required for synthesis of the light strand transcripts. The location of the in vitro light strand transcripts is consistent with a functional role in either in vivo transcription or priming of heavy strand DNA replication.

UI MeSH Term Description Entries
D002852 Chromatography, Ion Exchange Separation technique in which the stationary phase consists of ion exchange resins. The resins contain loosely held small ions that easily exchange places with other small ions of like charge present in solutions washed over the resins. Chromatography, Ion-Exchange,Ion-Exchange Chromatography,Chromatographies, Ion Exchange,Chromatographies, Ion-Exchange,Ion Exchange Chromatographies,Ion Exchange Chromatography,Ion-Exchange Chromatographies
D003001 Cloning, Molecular The insertion of recombinant DNA molecules from prokaryotic and/or eukaryotic sources into a replicating vehicle, such as a plasmid or virus vector, and the introduction of the resultant hybrid molecules into recipient cells without altering the viability of those cells. Molecular Cloning
D004261 DNA Replication The process by which a DNA molecule is duplicated. Autonomous Replication,Replication, Autonomous,Autonomous Replications,DNA Replications,Replication, DNA,Replications, Autonomous,Replications, DNA
D004272 DNA, Mitochondrial Double-stranded DNA of MITOCHONDRIA. In eukaryotes, the mitochondrial GENOME is circular and codes for ribosomal RNAs, transfer RNAs, and about 10 proteins. Mitochondrial DNA,mtDNA
D006801 Humans Members of the species Homo sapiens. Homo sapiens,Man (Taxonomy),Human,Man, Modern,Modern Man
D001483 Base Sequence The sequence of PURINES and PYRIMIDINES in nucleic acids and polynucleotides. It is also called nucleotide sequence. DNA Sequence,Nucleotide Sequence,RNA Sequence,DNA Sequences,Base Sequences,Nucleotide Sequences,RNA Sequences,Sequence, Base,Sequence, DNA,Sequence, Nucleotide,Sequence, RNA,Sequences, Base,Sequences, DNA,Sequences, Nucleotide,Sequences, RNA
D012321 DNA-Directed RNA Polymerases Enzymes that catalyze DNA template-directed extension of the 3'-end of an RNA strand one nucleotide at a time. They can initiate a chain de novo. In eukaryotes, three forms of the enzyme have been distinguished on the basis of sensitivity to alpha-amanitin, and the type of RNA synthesized. (From Enzyme Nomenclature, 1992). DNA-Dependent RNA Polymerases,RNA Polymerases,Transcriptases,DNA-Directed RNA Polymerase,RNA Polymerase,Transcriptase,DNA Dependent RNA Polymerases,DNA Directed RNA Polymerase,DNA Directed RNA Polymerases,Polymerase, DNA-Directed RNA,Polymerase, RNA,Polymerases, DNA-Dependent RNA,Polymerases, DNA-Directed RNA,Polymerases, RNA,RNA Polymerase, DNA-Directed,RNA Polymerases, DNA-Dependent,RNA Polymerases, DNA-Directed
D013698 Templates, Genetic Macromolecular molds for the synthesis of complementary macromolecules, as in DNA REPLICATION; GENETIC TRANSCRIPTION of DNA to RNA, and GENETIC TRANSLATION of RNA into POLYPEPTIDES. Genetic Template,Genetic Templates,Template, Genetic
D014158 Transcription, Genetic The biosynthesis of RNA carried out on a template of DNA. The biosynthesis of DNA from an RNA template is called REVERSE TRANSCRIPTION. Genetic Transcription

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