Analysis by the reductive-cleavage method of a polysaccharide containing 2-acetamido-2,6-dideoxy-D- and -L-galactopyranosyl residues. 1994

A J D'Ambra, and G R Gray
Department of Chemistry, University of Minnesota, Minneapolis 55455.

Modifications of the reductive-cleavage method for the analysis of 2-acetamido sugars were tested using a polysaccharide containing alpha-linked 2-acetamido-2,6-dideoxy-L-galactopyranosyl (Fuc pNAc) residues, beta-linked D-Fuc pNAc residues and 2-linked D-glucopyranosyl residues. Reductive cleavage of the fully methylated O-antigenic polysaccharide of Pseudomonas aeruginosa ATCC 33358 in the presence of triethylsilane and trimethylsilyl trifluoromethanesulfonate, followed by quenching with methanol and subsequent acetylation, unexpectedly resulted in nearly complete cleavage of all glycosidic linkages to yield 2-O-acetyl-1,5-anhydro-3,4,6-tri-O-methyl-D-glucitol (1a) and methyl 3-O-acetyl-2,6-dideoxy-4-O-methyl-2-(N-methylacetamido)-beta-D- and -L- galactopyranosides (3a and 4a) as the major products. When the reductive-cleavage reaction was quenched with (S)-2-butanol, the major FucNAc derivatives were the diastereomeric (S)-2-butyl glycosides 15a and 17a, confirming the presence of enantiomeric FucNAc residues in the repeating unit of the polysaccharide. However, compounds 15a and 17a were not detected in equimolar proportions, presumably as a consequence of diastereoselectivity in the reaction of the chiral alcohol with the respective intermediate oxazolinium ions. Reductive cleavage of the fully methylated polysaccharide in the presence of a mixture of trimethylsilyl methanesulfonate and boron trifluoride etherate, followed by quenching with methanol, resulted in incomplete cleavage, giving rise to three disaccharide derivatives whose sequences overlap that of the trisaccharide repeating unit in the polysaccharide. The lack of selectivity for cleavage at beta-D-FucNAc residues suggests that the alpha-L-FucNAc residues underwent anomerization prior to transglycosidation.

UI MeSH Term Description Entries
D008745 Methylation Addition of methyl groups. In histo-chemistry methylation is used to esterify carboxyl groups and remove sulfate groups by treating tissue sections with hot methanol in the presence of hydrochloric acid. (From Stedman, 25th ed) Methylations
D008969 Molecular Sequence Data Descriptions of specific amino acid, carbohydrate, or nucleotide sequences which have appeared in the published literature and/or are deposited in and maintained by databanks such as GENBANK, European Molecular Biology Laboratory (EMBL), National Biomedical Research Foundation (NBRF), or other sequence repositories. Sequence Data, Molecular,Molecular Sequencing Data,Data, Molecular Sequence,Data, Molecular Sequencing,Sequencing Data, Molecular
D009682 Magnetic Resonance Spectroscopy Spectroscopic method of measuring the magnetic moment of elementary particles such as atomic nuclei, protons or electrons. It is employed in clinical applications such as NMR Tomography (MAGNETIC RESONANCE IMAGING). In Vivo NMR Spectroscopy,MR Spectroscopy,Magnetic Resonance,NMR Spectroscopy,NMR Spectroscopy, In Vivo,Nuclear Magnetic Resonance,Spectroscopy, Magnetic Resonance,Spectroscopy, NMR,Spectroscopy, Nuclear Magnetic Resonance,Magnetic Resonance Spectroscopies,Magnetic Resonance, Nuclear,NMR Spectroscopies,Resonance Spectroscopy, Magnetic,Resonance, Magnetic,Resonance, Nuclear Magnetic,Spectroscopies, NMR,Spectroscopy, MR
D010084 Oxidation-Reduction A chemical reaction in which an electron is transferred from one molecule to another. The electron-donating molecule is the reducing agent or reductant; the electron-accepting molecule is the oxidizing agent or oxidant. Reducing and oxidizing agents function as conjugate reductant-oxidant pairs or redox pairs (Lehninger, Principles of Biochemistry, 1982, p471). Redox,Oxidation Reduction
D011135 Polysaccharides, Bacterial Polysaccharides found in bacteria and in capsules thereof. Bacterial Polysaccharides
D011522 Protons Stable elementary particles having the smallest known positive charge, found in the nuclei of all elements. The proton mass is less than that of a neutron. A proton is the nucleus of the light hydrogen atom, i.e., the hydrogen ion. Hydrogen Ions,Hydrogen Ion,Ion, Hydrogen,Ions, Hydrogen,Proton
D011550 Pseudomonas aeruginosa A species of gram-negative, aerobic, rod-shaped bacteria commonly isolated from clinical specimens (wound, burn, and urinary tract infections). It is also found widely distributed in soil and water. P. aeruginosa is a major agent of nosocomial infection. Bacillus aeruginosus,Bacillus pyocyaneus,Bacterium aeruginosum,Bacterium pyocyaneum,Micrococcus pyocyaneus,Pseudomonas polycolor,Pseudomonas pyocyanea
D002240 Carbohydrate Sequence The sequence of carbohydrates within POLYSACCHARIDES; GLYCOPROTEINS; and GLYCOLIPIDS. Carbohydrate Sequences,Sequence, Carbohydrate,Sequences, Carbohydrate
D005643 Fucose A six-member ring deoxysugar with the chemical formula C6H12O5. It lacks a hydroxyl group on the carbon at position 6 of the molecule. Deoxygalactose,alpha-Fucose,alpha Fucose
D000432 Methanol A colorless, flammable liquid used in the manufacture of FORMALDEHYDE and ACETIC ACID, in chemical synthesis, antifreeze, and as a solvent. Ingestion of methanol is toxic and may cause blindness. Alcohol, Methyl,Carbinol,Sodium Methoxide,Wood Alcohol,Alcohol, Wood,Methoxide, Sodium,Methyl Alcohol

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