Soluble tri- and dipeptidases in Escherichia coli K-12+. 1976

S Simmonds, and K S Szeto, and C G Fletterick

As part of a study of the metabolic role of peptidases in Escherichia coli K-12, cell extracts were examined for the presence of three enzymes originally identified [Sussman, A. J., and Gilvarg, C. (1970), J. Biol. Chem. 245, 6518] in extracts of the lysine auxotroph ASO13 by virtue of their activity toward lysine homopolymers. It has now been shown that the activity ascribed to a Co2+-dependent dilysine-specific enzyme is a function of the strain K-12 dipeptidase DP, a metal-dependent enzyme active toward a variety of dipeptides, and that the activity ascribed to a trilysine-specific enzyme is a function of the strain K-12 tripeptidase TP, an aminopeptidase capable of hydrolyzing substrates in the series X-Gly-Gly, X-Gly-X, and X-Leu-Gly (where X is Leu or Met) but devoid of activity toward dipeptides. The third enzyme, an oligopeptidase not previously observed in strain K-12, was found to include among its substrates not only di- and trilysine but other di- and tripeptides that are hydrolyzed by the di-and tripeptidase as well as by aminopeptidases L and AP; the aminopeptidases, however, lack activity toward di- and trilysine. The absence of oligopeptidase activity from extracts of strain AJOO5, a "PEPTIDE-DEFICIENT MUTANT" derived from strain ASO13 by Sussman and Gilvarg, has been confirmed, and strain AJOO5 has been shown to contain all the other peptidases known to be present in strain K-12. Possible functions of the oligopeptidase are proposed on the basis of its observed activity in vitro and of the basis of its observed activity in vitro and of the differences between the growth responses of strains AJOO5 and ASO13 in various media. Some general aspects of peptide metabolism are discussed with emphasis on the use of peptidase-deficient mutants in the study of this problem, and methods that may prove helpful in the isolation of such mutants are suggested.

UI MeSH Term Description Entries
D009154 Mutation Any detectable and heritable change in the genetic material that causes a change in the GENOTYPE and which is transmitted to daughter cells and to succeeding generations. Mutations
D004150 Dipeptidases EXOPEPTIDASES that specifically act on dipeptides. EC 3.4.13.
D004926 Escherichia coli A species of gram-negative, facultatively anaerobic, rod-shaped bacteria (GRAM-NEGATIVE FACULTATIVELY ANAEROBIC RODS) commonly found in the lower part of the intestine of warm-blooded animals. It is usually nonpathogenic, but some strains are known to produce DIARRHEA and pyogenic infections. Pathogenic strains (virotypes) are classified by their specific pathogenic mechanisms such as toxins (ENTEROTOXIGENIC ESCHERICHIA COLI), etc. Alkalescens-Dispar Group,Bacillus coli,Bacterium coli,Bacterium coli commune,Diffusely Adherent Escherichia coli,E coli,EAggEC,Enteroaggregative Escherichia coli,Enterococcus coli,Diffusely Adherent E. coli,Enteroaggregative E. coli,Enteroinvasive E. coli,Enteroinvasive Escherichia coli
D000626 Aminopeptidases A subclass of EXOPEPTIDASES that act on the free N terminus end of a polypeptide liberating a single amino acid residue. EC 3.4.11. Aminopeptidase
D013329 Structure-Activity Relationship The relationship between the chemical structure of a compound and its biological or pharmacological activity. Compounds are often classed together because they have structural characteristics in common including shape, size, stereochemical arrangement, and distribution of functional groups. Relationship, Structure-Activity,Relationships, Structure-Activity,Structure Activity Relationship,Structure-Activity Relationships

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