[Effect of polyanions on the structure of rat liver nuclear chromatin]. 1995

A N Prusov

Stepwise addition of polyanions (PA)-heparin and dextran sulfate-to interphase rat liver nuclei results in increased chromatin condensation (PA/DNA = 0.125) followed by its decondensation down to 10 nm fibrils (PA/DNA = 0.2) and, eventually, (PA/DNA > 0.3) to a new condensation of the material up to 30-50 nm fibrils and 0.15-0.5 M compact globular particles (GP). After subsequent addition of ammonium acetate (0.15-0.5 M) the whole nuclear material converts into an even network of GP connected by fibrils containing DNA. The GP diameter (40-70 nm) is unaffected in the PA/DNA range of 0.4 to 1.5. The GP-containing nuclei retain up to 85-90% of DNA and 50-70% of the protein. Treatment of the nuclei with staphylococcal nuclease reveals the absence of nucleosomal periodicity in the DNA structure. The nuclei treated with PA and the salt in the presence of EDTA retain all the histones of the nucleosomal core. When treated in the presence of Mg2+, the nuclei retain also histone H1. The GP obtained at pH 6.0-6.5 are the most compact ones. At pH 5.0 and 8.5 GP partly form tangles of approximately 10 nm granules linked by thin fibrils. GP can be reversibly unfolded into the same fibro-granular network when dyalized against low ionic strength solutions in the presence of EDTA. A more than 1.5-fold increase in the PA/DNA ratio or treatment of GP-containing nuclei with nucleases terminate in the failure of the fibrillar network between GP, giving rise to large globules (> 300 nm), presumably at the expense of GP fusion. In this case the nuclei lose DNA but retain no less than 70% of histones. The diameter of large globules depends on the concentration of PA. GP are suggested to arise by the aggregation of PA complexes with histone cores of nucleosomes and with other alkaline proteins of chromatin at the regularly spaced sites of partly deproteinated chromatin.

UI MeSH Term Description Entries
D008099 Liver A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances. Livers
D008274 Magnesium A metallic element that has the atomic symbol Mg, atomic number 12, and atomic weight 24.31. It is important for the activity of many enzymes, especially those involved in OXIDATIVE PHOSPHORYLATION.
D011108 Polymers Compounds formed by the joining of smaller, usually repeating, units linked by covalent bonds. These compounds often form large macromolecules (e.g., BIOPOLYMERS; PLASTICS). Polymer
D011487 Protein Conformation The characteristic 3-dimensional shape of a protein, including the secondary, supersecondary (motifs), tertiary (domains) and quaternary structure of the peptide chain. PROTEIN STRUCTURE, QUATERNARY describes the conformation assumed by multimeric proteins (aggregates of more than one polypeptide chain). Conformation, Protein,Conformations, Protein,Protein Conformations
D002467 Cell Nucleus Within a eukaryotic cell, a membrane-limited body which contains chromosomes and one or more nucleoli (CELL NUCLEOLUS). The nuclear membrane consists of a double unit-type membrane which is perforated by a number of pores; the outermost membrane is continuous with the ENDOPLASMIC RETICULUM. A cell may contain more than one nucleus. (From Singleton & Sainsbury, Dictionary of Microbiology and Molecular Biology, 2d ed) Cell Nuclei,Nuclei, Cell,Nucleus, Cell
D002843 Chromatin The material of CHROMOSOMES. It is a complex of DNA; HISTONES; and nonhistone proteins (CHROMOSOMAL PROTEINS, NON-HISTONE) found within the nucleus of a cell. Chromatins
D006863 Hydrogen-Ion Concentration The normality of a solution with respect to HYDROGEN ions; H+. It is related to acidity measurements in most cases by pH pH,Concentration, Hydrogen-Ion,Concentrations, Hydrogen-Ion,Hydrogen Ion Concentration,Hydrogen-Ion Concentrations
D000071228 Polyelectrolytes Naturally occurring or artificially made water-soluble POLYMERS whose repeating units are ionizable. Polyelectrolytes demonstrate attributes that are typical of salts, such as electrical conductivity, and typical of polymers, such as viscosity. Conjugated Polyelectrolyte,Polyelectrolyte,Conjugated Polyelectrolytes,Polyelectrolyte, Conjugated,Polyelectrolytes, Conjugated
D000818 Animals Unicellular or multicellular, heterotrophic organisms, that have sensation and the power of voluntary movement. Under the older five kingdom paradigm, Animalia was one of the kingdoms. Under the modern three domain model, Animalia represents one of the many groups in the domain EUKARYOTA. Animal,Metazoa,Animalia
D017510 Protein Folding Processes involved in the formation of TERTIARY PROTEIN STRUCTURE. Protein Folding, Globular,Folding, Globular Protein,Folding, Protein,Foldings, Globular Protein,Foldings, Protein,Globular Protein Folding,Globular Protein Foldings,Protein Foldings,Protein Foldings, Globular

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