Time-resolved solid-state NMR spectroscopy of 5-enolpyruvylshikimate-3-phosphate synthase. 1994

R J Appleyard, and W A Shuttleworth, and J N Evans
Department of Biochemistry and Biophysics, Washington State University, Pullman 99164-4660.

The novel technique of time-resolved solid-state NMR spectroscopy has been used to characterize the enzyme, 5-enolpyruvylshikimate-3-phosphate (EPSP) synthase, in both the forward and reverse directions over time periods ranging from 5 to 300 ms. The wealth of data currently available for EPSP synthase, in particular the pre-steady-state kinetics performed using chemical quench-flow experiments [Anderson, K. S., Sikorski, J. A., & Johnson, K. A. (1988) Biochemistry 27, 7395-7406], has made the enzyme an obvious choice as a proving ground for this new technique. Pre-steady-state 13C TOSS CP-MAS spectra have been obtained with a much improved signal-to-noise ratio, and corrections have been made to some previously reported assignments [Evans, J.N.S., Appleyard, R.J., & Shuttleworth, W.A. (1993) J. Am. Chem. Soc. 115, 1588-1590]. Peak fitting has allowed the extrapolation of NMR integral intensities of species involved in the reaction. These show a good correlation with concentrations calculated by simulations using the kinetic parameters obtained from the chemical quench-flow experiments. It is proposed that careful optimization of the contact time used will be necessary to obtain accurate, relative concentrations that will enable an independent kinetic simulation by time-resolved solid-state NMR. The technique shows much promise due to its nondestructive quenching procedure, which allows the direct observation of enzyme intermediates on a reaction pathway. However, its requirement of significantly larger amounts of enzyme does limit the technique to those proteins which naturally occur in high abundance or have been hyperexpressed.

UI MeSH Term Description Entries
D007700 Kinetics The rate dynamics in chemical or physical systems.
D008956 Models, Chemical Theoretical representations that simulate the behavior or activity of chemical processes or phenomena; includes the use of mathematical equations, computers, and other electronic equipment. Chemical Models,Chemical Model,Model, Chemical
D009682 Magnetic Resonance Spectroscopy Spectroscopic method of measuring the magnetic moment of elementary particles such as atomic nuclei, protons or electrons. It is employed in clinical applications such as NMR Tomography (MAGNETIC RESONANCE IMAGING). In Vivo NMR Spectroscopy,MR Spectroscopy,Magnetic Resonance,NMR Spectroscopy,NMR Spectroscopy, In Vivo,Nuclear Magnetic Resonance,Spectroscopy, Magnetic Resonance,Spectroscopy, NMR,Spectroscopy, Nuclear Magnetic Resonance,Magnetic Resonance Spectroscopies,Magnetic Resonance, Nuclear,NMR Spectroscopies,Resonance Spectroscopy, Magnetic,Resonance, Magnetic,Resonance, Nuclear Magnetic,Spectroscopies, NMR,Spectroscopy, MR
D004926 Escherichia coli A species of gram-negative, facultatively anaerobic, rod-shaped bacteria (GRAM-NEGATIVE FACULTATIVELY ANAEROBIC RODS) commonly found in the lower part of the intestine of warm-blooded animals. It is usually nonpathogenic, but some strains are known to produce DIARRHEA and pyogenic infections. Pathogenic strains (virotypes) are classified by their specific pathogenic mechanisms such as toxins (ENTEROTOXIGENIC ESCHERICHIA COLI), etc. Alkalescens-Dispar Group,Bacillus coli,Bacterium coli,Bacterium coli commune,Diffusely Adherent Escherichia coli,E coli,EAggEC,Enteroaggregative Escherichia coli,Enterococcus coli,Diffusely Adherent E. coli,Enteroaggregative E. coli,Enteroinvasive E. coli,Enteroinvasive Escherichia coli
D005615 Freezing Liquids transforming into solids by the removal of heat. Melting
D013816 Thermodynamics A rigorously mathematical analysis of energy relationships (heat, work, temperature, and equilibrium). It describes systems whose states are determined by thermal parameters, such as temperature, in addition to mechanical and electromagnetic parameters. (From Hawley's Condensed Chemical Dictionary, 12th ed) Thermodynamic
D014166 Transferases Transferases are enzymes transferring a group, for example, the methyl group or a glycosyl group, from one compound (generally regarded as donor) to another compound (generally regarded as acceptor). The classification is based on the scheme "donor:acceptor group transferase". (Enzyme Nomenclature, 1992) EC 2. Transferase
D051229 3-Phosphoshikimate 1-Carboxyvinyltransferase An enzyme of the shikimate pathway of AROMATIC AMINO ACID biosynthesis, it generates 5-enolpyruvylshikimate 3-phosphate and ORTHOPHOSPHATE from PHOSPHOENOLPYRUVATE and shikimate-3-phosphate. The shikimate pathway is present in BACTERIA and PLANTS but not in MAMMALS. 3-Enol-Pyruvoylshikimate-5-Phosphate Synthase,3-Enolpyruvylshikimate 5-Phosphate Synthase,5-Enol-Pyruvyl Shikimate-3-Phosphate Synthase,5-Enolpyruvyl Shikimic Acid 3-Phosphate Synthetase,5-Enolpyruvylshikimate-3-Phosphate Synthase,5-Enolpyruvylshikimic Acid-3-Phosphate Synthase,EPSP Synthase,aroA 3-Phosphoshikimate 1-Carboxyvinyltransferase,1-Carboxyvinyltransferase, 3-Phosphoshikimate,1-Carboxyvinyltransferase, aroA 3-Phosphoshikimate,3 Enol Pyruvoylshikimate 5 Phosphate Synthase,3 Enolpyruvylshikimate 5 Phosphate Synthase,3 Phosphoshikimate 1 Carboxyvinyltransferase,3-Phosphoshikimate 1-Carboxyvinyltransferase, aroA,5 Enol Pyruvyl Shikimate 3 Phosphate Synthase,5 Enolpyruvyl Shikimic Acid 3 Phosphate Synthetase,5 Enolpyruvylshikimate 3 Phosphate Synthase,5 Enolpyruvylshikimic Acid 3 Phosphate Synthase,5-Phosphate Synthase, 3-Enolpyruvylshikimate,Acid-3-Phosphate Synthase, 5-Enolpyruvylshikimic,Shikimate-3-Phosphate Synthase, 5-Enol-Pyruvyl,Synthase, 3-Enol-Pyruvoylshikimate-5-Phosphate,Synthase, 3-Enolpyruvylshikimate 5-Phosphate,Synthase, 5-Enol-Pyruvyl Shikimate-3-Phosphate,Synthase, 5-Enolpyruvylshikimate-3-Phosphate,Synthase, 5-Enolpyruvylshikimic Acid-3-Phosphate,Synthase, EPSP,aroA 3 Phosphoshikimate 1 Carboxyvinyltransferase
D019883 Alkyl and Aryl Transferases A somewhat heterogeneous class of enzymes that catalyze the transfer of alkyl or related groups (excluding methyl groups). EC 2.5. Alkyltransferase,Alkyltransferases,Aryltransferase,Aryltransferases

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