A structure-based catalytic mechanism for the xanthine oxidase family of molybdenum enzymes. 1996

R Huber, and P Hof, and R O Duarte, and J J Moura, and I Moura, and M Y Liu, and J LeGall, and R Hille, and M Archer, and M J Romão
Max-Planck-Institut für Biochemie, Martinsried, Germany.

The crystal structure of the xanthine oxidase-related molybdenum-iron protein aldehyde oxido-reductase from the sulfate reducing anaerobic Gram-negative bacterium Desulfovibrio gigas (Mop) was analyzed in its desulfo-, sulfo-, oxidized, reduced, and alcohol-bound forms at 1.8-A resolution. In the sulfo-form the molybdenum molybdopterin cytosine dinucleotide cofactor has a dithiolene-bound fac-[Mo, = O, = S, ---(OH2)] substructure. Bound inhibitory isopropanol in the inner compartment of the substrate binding tunnel is a model for the Michaelis complex of the reaction with aldehydes (H-C = O,-R). The reaction is proposed to proceed by transfer of the molybdenum-bound water molecule as OH- after proton transfer to Glu-869 to the carbonyl carbon of the substrate in concert with hydride transfer to the sulfido group to generate [MoIV, = O, -SH, ---(O-C = O, -R)). Dissociation of the carboxylic acid product may be facilitated by transient binding of Glu-869 to the molybdenum. The metal-bound water is replenished from a chain of internal water molecules. A second alcohol binding site in the spacious outer compartment may cause the strong substrate inhibition observed. This compartment is the putative binding site of large inhibitors of xanthine oxidase.

UI MeSH Term Description Entries
D008958 Models, Molecular Models used experimentally or theoretically to study molecular shape, electronic properties, or interactions; includes analogous molecules, computer-generated graphics, and mechanical structures. Molecular Models,Model, Molecular,Molecular Model
D008982 Molybdenum A metallic element with the atomic symbol Mo, atomic number 42, and atomic weight 95.95. It is an essential trace element, being a component of the enzymes xanthine oxidase, aldehyde oxidase, and nitrate reductase. Molybdenum-98,Molybdenum 98
D010084 Oxidation-Reduction A chemical reaction in which an electron is transferred from one molecule to another. The electron-donating molecule is the reducing agent or reductant; the electron-accepting molecule is the oxidizing agent or oxidant. Reducing and oxidizing agents function as conjugate reductant-oxidant pairs or redox pairs (Lehninger, Principles of Biochemistry, 1982, p471). Redox,Oxidation Reduction
D011622 Pterins Compounds based on 2-amino-4-hydroxypteridine. Pterin
D003597 Cytosine Nucleotides A group of pyrimidine NUCLEOTIDES which contain CYTOSINE. Cytidine Phosphates,Nucleotides, Cytosine,Phosphates, Cytidine
D003901 Desulfovibrio A genus of gram-negative, anaerobic, rod-shaped bacteria capable of reducing sulfur compounds to hydrogen sulfide. Organisms are isolated from anaerobic mud of fresh and salt water, animal intestines, manure, and feces.
D000445 Aldehyde Oxidoreductases Oxidoreductases that are specific for ALDEHYDES. Aldehyde Oxidoreductase,Oxidoreductase, Aldehyde,Oxidoreductases, Aldehyde
D001426 Bacterial Proteins Proteins found in any species of bacterium. Bacterial Gene Products,Bacterial Gene Proteins,Gene Products, Bacterial,Bacterial Gene Product,Bacterial Gene Protein,Bacterial Protein,Gene Product, Bacterial,Gene Protein, Bacterial,Gene Proteins, Bacterial,Protein, Bacterial,Proteins, Bacterial
D014969 Xanthine Oxidase An iron-molybdenum flavoprotein containing FLAVIN-ADENINE DINUCLEOTIDE that oxidizes hypoxanthine, some other purines and pterins, and aldehydes. Deficiency of the enzyme, an autosomal recessive trait, causes xanthinuria. Hypoxanthine Oxidase,Hypoxanthine Dehydrogenase,Hypoxanthine-Xanthine Oxidase,Purine-Xanthine Oxidase,Dehydrogenase, Hypoxanthine,Hypoxanthine Xanthine Oxidase,Oxidase, Hypoxanthine,Oxidase, Hypoxanthine-Xanthine,Oxidase, Purine-Xanthine,Oxidase, Xanthine,Purine Xanthine Oxidase
D018360 Crystallography, X-Ray The study of crystal structure using X-RAY DIFFRACTION techniques. (McGraw-Hill Dictionary of Scientific and Technical Terms, 4th ed) X-Ray Crystallography,Crystallography, X Ray,Crystallography, Xray,X Ray Crystallography,Xray Crystallography,Crystallographies, X Ray,X Ray Crystallographies

Related Publications

R Huber, and P Hof, and R O Duarte, and J J Moura, and I Moura, and M Y Liu, and J LeGall, and R Hille, and M Archer, and M J Romão
April 2006, Current opinion in chemical biology,
R Huber, and P Hof, and R O Duarte, and J J Moura, and I Moura, and M Y Liu, and J LeGall, and R Hille, and M Archer, and M J Romão
January 2002, Metal ions in biological systems,
R Huber, and P Hof, and R O Duarte, and J J Moura, and I Moura, and M Y Liu, and J LeGall, and R Hille, and M Archer, and M J Romão
March 2015, Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry,
R Huber, and P Hof, and R O Duarte, and J J Moura, and I Moura, and M Y Liu, and J LeGall, and R Hille, and M Archer, and M J Romão
August 1965, Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme,
R Huber, and P Hof, and R O Duarte, and J J Moura, and I Moura, and M Y Liu, and J LeGall, and R Hille, and M Archer, and M J Romão
May 1954, Annals of the New York Academy of Sciences,
R Huber, and P Hof, and R O Duarte, and J J Moura, and I Moura, and M Y Liu, and J LeGall, and R Hille, and M Archer, and M J Romão
December 2001, The Journal of biological chemistry,
R Huber, and P Hof, and R O Duarte, and J J Moura, and I Moura, and M Y Liu, and J LeGall, and R Hille, and M Archer, and M J Romão
October 1999, Biochemistry,
R Huber, and P Hof, and R O Duarte, and J J Moura, and I Moura, and M Y Liu, and J LeGall, and R Hille, and M Archer, and M J Romão
September 2000, Proceedings of the National Academy of Sciences of the United States of America,
R Huber, and P Hof, and R O Duarte, and J J Moura, and I Moura, and M Y Liu, and J LeGall, and R Hille, and M Archer, and M J Romão
August 1995, FASEB journal : official publication of the Federation of American Societies for Experimental Biology,
R Huber, and P Hof, and R O Duarte, and J J Moura, and I Moura, and M Y Liu, and J LeGall, and R Hille, and M Archer, and M J Romão
January 1997, Annual review of biochemistry,
Copied contents to your clipboard!