Detection of negative-stranded hepatitis C virus RNA using a novel strand-specific reverse transcription-polymerase chain reaction. 1998

T Mizutani, and M Ikeda, and S Saito, and K Sugiyama, and K Shimotohno, and N Kato
Virology Division, National Cancer Center Research Institute, Tokyo, Japan.

We developed a novel single-tube reverse transcription-polymerase chain reaction (RT-PCR) for the specific detection of negative-stranded hepatitis C virus (HCV) RNA. By using in vitro synthesized positive- and negative-stranded HCV RNAs, it was demonstrated that as few as 50 copies of negative-stranded HCV RNA could be specifically detected with a set of primers that amplify a 232-base pair sequence unique to the 5'-non-coding region of HCV RNA, while 10(8) copies of positive-stranded HCV RNA were not detected. In addition, we demonstrated that this method allows the detection as few as 100 copies of negative-stranded HCV RNA even with the coexistence of a 100-fold excess of positive-stranded HCV RNA. Furthermore, with this method, negative-stranded HCV RNA was detected in RNAs from liver biopsy specimens obtained from patients with chronic hepatitis C, but not in RNAs from HCV-positive sera.

UI MeSH Term Description Entries
D006801 Humans Members of the species Homo sapiens. Homo sapiens,Man (Taxonomy),Human,Man, Modern,Modern Man
D012367 RNA, Viral Ribonucleic acid that makes up the genetic material of viruses. Viral RNA
D016133 Polymerase Chain Reaction In vitro method for producing large amounts of specific DNA or RNA fragments of defined length and sequence from small amounts of short oligonucleotide flanking sequences (primers). The essential steps include thermal denaturation of the double-stranded target molecules, annealing of the primers to their complementary sequences, and extension of the annealed primers by enzymatic synthesis with DNA polymerase. The reaction is efficient, specific, and extremely sensitive. Uses for the reaction include disease diagnosis, detection of difficult-to-isolate pathogens, mutation analysis, genetic testing, DNA sequencing, and analyzing evolutionary relationships. Anchored PCR,Inverse PCR,Nested PCR,PCR,Anchored Polymerase Chain Reaction,Inverse Polymerase Chain Reaction,Nested Polymerase Chain Reaction,PCR, Anchored,PCR, Inverse,PCR, Nested,Polymerase Chain Reactions,Reaction, Polymerase Chain,Reactions, Polymerase Chain
D016174 Hepacivirus A genus of FLAVIVIRIDAE causing parenterally-transmitted HEPATITIS C which is associated with transfusions and drug abuse. Hepatitis C virus is the type species. Hepatitis C virus,Hepatitis C-Like Viruses,Hepaciviruses,Hepatitis C Like Viruses,Hepatitis C viruses,Hepatitis C-Like Virus

Related Publications

T Mizutani, and M Ikeda, and S Saito, and K Sugiyama, and K Shimotohno, and N Kato
August 2000, Hepatology (Baltimore, Md.),
T Mizutani, and M Ikeda, and S Saito, and K Sugiyama, and K Shimotohno, and N Kato
September 1995, Nihon rinsho. Japanese journal of clinical medicine,
T Mizutani, and M Ikeda, and S Saito, and K Sugiyama, and K Shimotohno, and N Kato
January 1999, Clinical chemistry and laboratory medicine,
T Mizutani, and M Ikeda, and S Saito, and K Sugiyama, and K Shimotohno, and N Kato
November 1992, European journal of clinical chemistry and clinical biochemistry : journal of the Forum of European Clinical Chemistry Societies,
T Mizutani, and M Ikeda, and S Saito, and K Sugiyama, and K Shimotohno, and N Kato
April 1993, Journal of clinical microbiology,
T Mizutani, and M Ikeda, and S Saito, and K Sugiyama, and K Shimotohno, and N Kato
January 1995, Analytical biochemistry,
T Mizutani, and M Ikeda, and S Saito, and K Sugiyama, and K Shimotohno, and N Kato
May 1997, Journal of medical virology,
T Mizutani, and M Ikeda, and S Saito, and K Sugiyama, and K Shimotohno, and N Kato
January 1995, Research in virology,
T Mizutani, and M Ikeda, and S Saito, and K Sugiyama, and K Shimotohno, and N Kato
March 1992, Hepatology (Baltimore, Md.),
T Mizutani, and M Ikeda, and S Saito, and K Sugiyama, and K Shimotohno, and N Kato
September 1998, Zhonghua shi yan he lin chuang bing du xue za zhi = Zhonghua shiyan he linchuang bingduxue zazhi = Chinese journal of experimental and clinical virology,
Copied contents to your clipboard!