-transparent.png){kind=logo}
We address the problem of efficiently aligning a transcribed and spliced DNA sequence with a genomic sequence containing that gene, allowing for introns in the genomic sequence and a relatively small number of sequencing errors. A freely available computer program, described herein, solves the problem for a 100-kb genomic sequence in a few seconds on a workstation.
Related Publications
L Florea, and
G Hartzell, and
Z Zhang, and
G M Rubin, and
W Miller
May 2008,
Nucleic acids research,
L Florea, and
G Hartzell, and
Z Zhang, and
G M Rubin, and
W Miller
January 1997,
Journal of computational biology : a journal of computational molecular cell biology,
L Florea, and
G Hartzell, and
Z Zhang, and
G M Rubin, and
W Miller
January 1991,
Bollettino della Societa italiana di biologia sperimentale,
L Florea, and
G Hartzell, and
Z Zhang, and
G M Rubin, and
W Miller
January 1982,
Nucleic acids research,
L Florea, and
G Hartzell, and
Z Zhang, and
G M Rubin, and
W Miller
January 1984,
Nucleic acids research,
L Florea, and
G Hartzell, and
Z Zhang, and
G M Rubin, and
W Miller
September 1984,
Archivos de biologia y medicina experimentales,
L Florea, and
G Hartzell, and
Z Zhang, and
G M Rubin, and
W Miller
April 1996,
Indian journal of biochemistry & biophysics,
L Florea, and
G Hartzell, and
Z Zhang, and
G M Rubin, and
W Miller
April 2000,
Genome research,
L Florea, and
G Hartzell, and
Z Zhang, and
G M Rubin, and
W Miller
January 1982,
Nucleic acids research,
L Florea, and
G Hartzell, and
Z Zhang, and
G M Rubin, and
W Miller
December 1995,
Gene,
