It is known that visual transients prolong saccadic latency and reduce saccadic frequency. The latter effect was attributed to subcortical structures because it occurred only 60-70 ms after stimulus onset. We examined the effects of large task-irrelevant transients on steady-state pursuit and the generation of catch-up saccades. Two screen-wide stripes of equal contrast (4, 20, or 100%) were briefly flashed at equal eccentricities (3, 6, or 12°) from the pursuit target. About 100 ms after flash onset, we observed that pursuit gain dropped by 6-12% and catch-up saccades were entirely suppressed. The relatively long latency of the inhibition suggests that it results from cortical mechanisms that may act by promoting fixation or the deployment of attention over the visual field. In addition, we show that a loud irrelevant sound is able to generate the same inhibition of saccades as visual transients, whereas it only induces a weak modulation of pursuit gain, indicating a privileged access of acoustic information to the saccadic system. Finally, irrelevant changes in motion direction orthogonal to pursuit had a smaller and later inhibitory effect.