Nonomuraea insulae sp. nov., isolated from forest soil. 2018

Salih Saricaoglu, and Imen Nouioui, and Hilal Ay, and Hayrettin Saygin, and Kadriye Inan Bektas, and Kiymet Guven, and Demet Cetin, and Hans-Peter Klenk, and Kamil Isik, and Nevzat Sahin
Department of Nursing, School of Health, Ahi Evran University, 40100, Kırşehir, Turkey.

Strain H2R21T, a novel actinobacterium, isolated from a forest soil sample collected from Heybeliada, Istanbul, Turkey, and a polyphasic approach was used for characterisation of the strain. Chemotaxonomic and morphological characterisation of strain H2R21T indicated that it belongs to the genus Nonomuraea. 16S rRNA gene sequence similarity showed that the strain is closely related to Nonomuraea purpurea 1SM4-01T (99.1%) and Nonomuraea solani CGMCC 4.7037T (98.4%). DNA-DNA relatedness values were found to be lower than 70% between the isolate and its phylogenetic neighbours N. purpurea 1SM4-01T, N. solani CGMCC 4.7037T and Nonomuraea rhizophila YIM 67092T. The whole cell hydrolysates of strain H2R21T were found to contain meso-diaminopimelic acid as the diagnostic diamino acid and glucose, madurose, mannose and ribose as the cell sugars. The polar lipids were identified as phosphatidylglycerol, diphosphatidylglycerol, phosphatidylmethylethanolamine, phosphatidylethanolamine, hydroxy-phosphatidylethanolamine, dihydroxy-phosphatidylethanolamine, phosphatidylinositol, glycophosphatidylinositol, two glycophospholipids and two unidentified lipids. The predominant menaquinones were identified as MK-9(H4) and MK-9(H6). The major fatty acids were found to be iso-C16:0, iso-C16:0 2OH and C17:0 10-methyl. On the basis of DNA-DNA relatedness data and some phenotypic characteristics, it is evident that strain H2R21T can be distinguished from the closely related species in the genus Nonomuraea. Thus, it is concluded that strain H2R21T represents a novel species of the genus Nonomuraea, for which the name Nonomuraea insulae sp. nov. is proposed. The type strain is H2R21T (= DSM 102915T = CGMCC 4.7338T = KCTC 39769T).

UI MeSH Term Description Entries
D010802 Phylogeny The relationships of groups of organisms as reflected by their genetic makeup. Community Phylogenetics,Molecular Phylogenetics,Phylogenetic Analyses,Phylogenetic Analysis,Phylogenetic Clustering,Phylogenetic Comparative Analysis,Phylogenetic Comparative Methods,Phylogenetic Distance,Phylogenetic Generalized Least Squares,Phylogenetic Groups,Phylogenetic Incongruence,Phylogenetic Inference,Phylogenetic Networks,Phylogenetic Reconstruction,Phylogenetic Relatedness,Phylogenetic Relationships,Phylogenetic Signal,Phylogenetic Structure,Phylogenetic Tree,Phylogenetic Trees,Phylogenomics,Analyse, Phylogenetic,Analysis, Phylogenetic,Analysis, Phylogenetic Comparative,Clustering, Phylogenetic,Community Phylogenetic,Comparative Analysis, Phylogenetic,Comparative Method, Phylogenetic,Distance, Phylogenetic,Group, Phylogenetic,Incongruence, Phylogenetic,Inference, Phylogenetic,Method, Phylogenetic Comparative,Molecular Phylogenetic,Network, Phylogenetic,Phylogenetic Analyse,Phylogenetic Clusterings,Phylogenetic Comparative Analyses,Phylogenetic Comparative Method,Phylogenetic Distances,Phylogenetic Group,Phylogenetic Incongruences,Phylogenetic Inferences,Phylogenetic Network,Phylogenetic Reconstructions,Phylogenetic Relatednesses,Phylogenetic Relationship,Phylogenetic Signals,Phylogenetic Structures,Phylogenetic, Community,Phylogenetic, Molecular,Phylogenies,Phylogenomic,Reconstruction, Phylogenetic,Relatedness, Phylogenetic,Relationship, Phylogenetic,Signal, Phylogenetic,Structure, Phylogenetic,Tree, Phylogenetic
D004269 DNA, Bacterial Deoxyribonucleic acid that makes up the genetic material of bacteria. Bacterial DNA
D005227 Fatty Acids Organic, monobasic acids derived from hydrocarbons by the equivalent of oxidation of a methyl group to an alcohol, aldehyde, and then acid. Fatty acids are saturated and unsaturated (FATTY ACIDS, UNSATURATED). (Grant & Hackh's Chemical Dictionary, 5th ed) Aliphatic Acid,Esterified Fatty Acid,Fatty Acid,Fatty Acids, Esterified,Fatty Acids, Saturated,Saturated Fatty Acid,Aliphatic Acids,Acid, Aliphatic,Acid, Esterified Fatty,Acid, Saturated Fatty,Esterified Fatty Acids,Fatty Acid, Esterified,Fatty Acid, Saturated,Saturated Fatty Acids
D000192 Actinomycetales An order of gram-positive, primarily aerobic BACTERIA that tend to form branching filaments. Corynebacteriaceae,Coryneform Group
D012336 RNA, Ribosomal, 16S Constituent of 30S subunit prokaryotic ribosomes containing 1600 nucleotides and 21 proteins. 16S rRNA is involved in initiation of polypeptide synthesis. 16S Ribosomal RNA,16S rRNA,RNA, 16S Ribosomal,Ribosomal RNA, 16S,rRNA, 16S
D012988 Soil Microbiology The presence of bacteria, viruses, and fungi in the soil. This term is not restricted to pathogenic organisms. Microbiology, Soil
D014421 Turkey Country in Southeastern Europe and Southwestern Asia bordering the Black Sea, between Bulgaria and Georgia, and bordering the Aegean Sea and the Mediterranean Sea, between Greece and Syria. The capital is Ankara. Turkiye
D015373 Bacterial Typing Techniques Procedures for identifying types and strains of bacteria. The most frequently employed typing systems are BACTERIOPHAGE TYPING and SEROTYPING as well as bacteriocin typing and biotyping. Bacteriocin Typing,Biotyping, Bacterial,Typing, Bacterial,Bacterial Biotyping,Bacterial Typing,Bacterial Typing Technic,Bacterial Typing Technics,Bacterial Typing Technique,Technic, Bacterial Typing,Technics, Bacterial Typing,Technique, Bacterial Typing,Techniques, Bacterial Typing,Typing Technic, Bacterial,Typing Technics, Bacterial,Typing Technique, Bacterial,Typing Techniques, Bacterial,Typing, Bacteriocin
D065928 Forests An ecosystem dominated by trees and other woody vegetation. Forested Areas,Forestlands,Woodland,Area, Forested,Areas, Forested,Forest,Forested Area,Forestland,Woodlands

Related Publications

Salih Saricaoglu, and Imen Nouioui, and Hilal Ay, and Hayrettin Saygin, and Kadriye Inan Bektas, and Kiymet Guven, and Demet Cetin, and Hans-Peter Klenk, and Kamil Isik, and Nevzat Sahin
June 2019, International journal of systematic and evolutionary microbiology,
Salih Saricaoglu, and Imen Nouioui, and Hilal Ay, and Hayrettin Saygin, and Kadriye Inan Bektas, and Kiymet Guven, and Demet Cetin, and Hans-Peter Klenk, and Kamil Isik, and Nevzat Sahin
June 2017, International journal of systematic and evolutionary microbiology,
Salih Saricaoglu, and Imen Nouioui, and Hilal Ay, and Hayrettin Saygin, and Kadriye Inan Bektas, and Kiymet Guven, and Demet Cetin, and Hans-Peter Klenk, and Kamil Isik, and Nevzat Sahin
January 2008, International journal of systematic and evolutionary microbiology,
Salih Saricaoglu, and Imen Nouioui, and Hilal Ay, and Hayrettin Saygin, and Kadriye Inan Bektas, and Kiymet Guven, and Demet Cetin, and Hans-Peter Klenk, and Kamil Isik, and Nevzat Sahin
January 2007, International journal of systematic and evolutionary microbiology,
Salih Saricaoglu, and Imen Nouioui, and Hilal Ay, and Hayrettin Saygin, and Kadriye Inan Bektas, and Kiymet Guven, and Demet Cetin, and Hans-Peter Klenk, and Kamil Isik, and Nevzat Sahin
September 2007, International journal of systematic and evolutionary microbiology,
Salih Saricaoglu, and Imen Nouioui, and Hilal Ay, and Hayrettin Saygin, and Kadriye Inan Bektas, and Kiymet Guven, and Demet Cetin, and Hans-Peter Klenk, and Kamil Isik, and Nevzat Sahin
July 2009, International journal of systematic and evolutionary microbiology,
Salih Saricaoglu, and Imen Nouioui, and Hilal Ay, and Hayrettin Saygin, and Kadriye Inan Bektas, and Kiymet Guven, and Demet Cetin, and Hans-Peter Klenk, and Kamil Isik, and Nevzat Sahin
September 2015, Journal of microbiology (Seoul, Korea),
Salih Saricaoglu, and Imen Nouioui, and Hilal Ay, and Hayrettin Saygin, and Kadriye Inan Bektas, and Kiymet Guven, and Demet Cetin, and Hans-Peter Klenk, and Kamil Isik, and Nevzat Sahin
July 2021, Archives of microbiology,
Salih Saricaoglu, and Imen Nouioui, and Hilal Ay, and Hayrettin Saygin, and Kadriye Inan Bektas, and Kiymet Guven, and Demet Cetin, and Hans-Peter Klenk, and Kamil Isik, and Nevzat Sahin
July 2014, International journal of systematic and evolutionary microbiology,
Salih Saricaoglu, and Imen Nouioui, and Hilal Ay, and Hayrettin Saygin, and Kadriye Inan Bektas, and Kiymet Guven, and Demet Cetin, and Hans-Peter Klenk, and Kamil Isik, and Nevzat Sahin
May 2022, International journal of systematic and evolutionary microbiology,
Copied contents to your clipboard!