Proximity-enhanced protein crosslinking through an alkene-tetrazine reaction. 2023

Bin Ma, and Wei Niu, and Jiantao Guo
Department of Chemistry, University of Nebraska-Lincoln, Lincoln, NE 68588, United States.

The inverse electron demand Diels-Alder (iEDDA) reaction between a tetrazine and a strained alkene has been widely explored as useful bioorthogonal chemistry for selective labeling of biomolecules. In this work, we exploit the slow reaction between a non-conjugated terminal alkene and a tetrazine, and apply this reaction to achieving a proximity-enhanced protein crosslinking. In one protein subunit, a terminal alkene-containing amino acid was site-specifically incorporated in response to an amber nonsense codon. In another protein subunit, a tetrazine moiety was introduced through the attachment to a cysteine residue. Fast protein crosslinking was achieved due to a large increase in effective molarity of the two reactants that were brought to close proximity by the two interacting protein subunits. Such a proximity-enhanced protein crosslinking is useful for the study of protein-protein interactions.

UI MeSH Term Description Entries
D006571 Heterocyclic Compounds Cyclic compounds that include atoms other than carbon in their ring structure. Heterocyclic Compound,Compound, Heterocyclic,Compounds, Heterocyclic
D000475 Alkenes Unsaturated hydrocarbons of the type Cn-H2n, indicated by the suffix -ene. (Grant & Hackh's Chemical Dictionary, 5th ed, p408) Alkene,Olefin,Olefins,Pentene,Pentenes
D000596 Amino Acids Organic compounds that generally contain an amino (-NH2) and a carboxyl (-COOH) group. Twenty alpha-amino acids are the subunits which are polymerized to form proteins. Amino Acid,Acid, Amino,Acids, Amino
D061565 Cycloaddition Reaction Synthetic organic reactions that use reactions between unsaturated molecules to form cyclical products. Cycloaddition,Cycloaddition Reaction Techniques,Diels-Alder Reaction,Cycloaddition Reaction Technique,Cycloaddition Reactions,Diels Alder Reaction,Reaction Technique, Cycloaddition,Reaction Techniques, Cycloaddition,Reaction, Cycloaddition,Reaction, Diels-Alder,Reactions, Cycloaddition,Technique, Cycloaddition Reaction,Techniques, Cycloaddition Reaction
D021122 Protein Subunits Single chains of amino acids that are the units of multimeric PROTEINS. Multimeric proteins can be composed of identical or non-identical subunits. One or more monomeric subunits may compose a protomer which itself is a subunit structure of a larger assembly. Protomers,Protein Subunit,Protomer,Subunit, Protein,Subunits, Protein

Related Publications

Bin Ma, and Wei Niu, and Jiantao Guo
April 2018, Chemical communications (Cambridge, England),
Bin Ma, and Wei Niu, and Jiantao Guo
February 2014, Angewandte Chemie (International ed. in English),
Bin Ma, and Wei Niu, and Jiantao Guo
November 2016, Organic & biomolecular chemistry,
Bin Ma, and Wei Niu, and Jiantao Guo
August 2014, Angewandte Chemie (International ed. in English),
Bin Ma, and Wei Niu, and Jiantao Guo
April 2018, Organic & biomolecular chemistry,
Bin Ma, and Wei Niu, and Jiantao Guo
June 2023, Current opinion in chemical biology,
Bin Ma, and Wei Niu, and Jiantao Guo
September 2013, Nature methods,
Bin Ma, and Wei Niu, and Jiantao Guo
April 2021, Organic & biomolecular chemistry,
Bin Ma, and Wei Niu, and Jiantao Guo
September 2019, Angewandte Chemie (International ed. in English),
Copied contents to your clipboard!